Escherichia coli O9 HS (commensal): EcHS_A2113
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Entry
EcHS_A2113 CDS
T00591
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
ecx
Escherichia coli O9 HS (commensal)
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecx01002
]
EcHS_A2113
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecx01011
]
EcHS_A2113
Peptidases and inhibitors [BR:
ecx01002
]
Cysteine peptidases
Family C82
EcHS_A2113
Peptidoglycan biosynthesis and degradation proteins [BR:
ecx01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
EcHS_A2113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
ABV06408
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All DBs
Position
complement(2100993..2101925)
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AA seq
310 aa
AA seq
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MRRVNILCSFALLFASQNSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQG
LSNMLEANPGADVFLPKPGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVF
PIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLY
AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTE
PDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPV
QISSGSRQMF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtgtaaatattctttgctcatttgctctgctttttgccagccaaaatagcctg
gcggtaacttatccattacctccagagggtagccgtttagtggggcagtcgcttactgta
actgttcctgatcacaatactcagccgctggagacttttgccgcacaatacgggcaaggg
ttaagtaatatgctggaagcgaatccgggcgctgatgtttttttgccgaagcctggctca
caactcaccattccgcagcaactgattttgcccgccactgttcgtaaagggattgtggtt
aacgtcgctgaaatgcgtctttattactatccgccagacagtaatacagtggaagtcttt
cctattggtatcggccaggctgggcgagaaaccccgcgtaactgggtgactaccgttgaa
cgtaaacaagaagcaccaacctggacgccaacgccgaacactcggcgcgaatatgcgaaa
cgaggggagagtttgcccgcatttgttcctgcggggcccgataaccccatggggctgtac
gcgatttatattggcaggttgtatgccatccacggtaccaatgccaattttggtattgga
cttcgggtaagtcagggctgtattcgtctgcgcaatgacgatatcaaatatctgtttgat
aatgttcctgttggaacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaa
ccagatggctcgaactggctggaagttcatgagccgctgtcgcgcaatcgtgcagaatat
gagtctgaccgaaaagtgccattgccggtaaccccatctttgcgggcgtttatcaacggg
caagaagttgatgtgaatcgcgcaaatgctgcgttgcaacgtcgatcaggaatgcctgtg
caaattagttctggttcaagacagatgttttaa
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