Escherichia coli O9 HS (commensal): EcHS_A2139
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Entry
EcHS_A2139 CDS
T00591
Name
(GenBank) antigen 43, truncation
KO
K12687
antigen 43
Organism
ecx
Escherichia coli O9 HS (commensal)
Pathway
ecx02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
EcHS_A2139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecx02000
]
EcHS_A2139
02044 Secretion system [BR:
ecx02044
]
EcHS_A2139
Transporters [BR:
ecx02000
]
Other transporters
Pores ion channels [TC:
1
]
EcHS_A2139
Secretion system [BR:
ecx02044
]
Type V secretion system
Autotransporter-1 (AT-1) family
EcHS_A2139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIDA
ESPR
Motif
Other DBs
NCBI-ProteinID:
ABV06428
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All DBs
Position
2120165..2121916
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AA seq
583 aa
AA seq
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MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG
ETVNDGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL
QRVNAGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG
AMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINENGRQIVAAEGTANTTVVYAGGD
QTVHGYALDTTLNGGNQYVHNGGTASGTVVNSDGWQIVKEGGLADFTIVNQKGKLQVNAG
GTATNVTLKQGGALVTSTAATVTGSNRLGNFTVENGNADGVVLESGGRLDVLEGHSAWKT
LVDDGGTLAVSAGGKATDVTMTSGGALIADSGATVEGTNASGKFSIDGISGQASGLLLEN
GGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGE
IHFDNQTTQDAVLSRAVAKGDSPVTFHKLTTTNLTGQGGTINMRVRLDGSNTSDQLVING
GQATGKTWLAFTNVGNSNLGVATSGQGTLHSDALFRRPSGAGG
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgacatctgaacaccagctacaggctggtatggaatcacattacgggcaccctg
gtggtggcctccgaactggcccgctcacggggaaaacgcgccggtgtggcggttgcactg
tctcttgctgctgtcacatcagtcccggcactggctgctgacacggttgtacaggcggga
gaaaccgtgaacgacggaacactgacaaatcatgacaaccagattgtcctcggtactgcc
aacggaatgaccatcagtaccgggctggagtatgggccggataacgaagccaataccggc
ggacaatggatacaaaatggcggtatcgccaacaacactactgtcaccggtggtggtctt
cagagagtgaatgccggaggaagcgtttcagacacggttatcagtgccggaggaggacag
agccttcaggggcaggcagtgaacaccactctgaacggcggtgagcagtgggtacatgaa
ggcgggattgcaacgggtaccgtcattaatgagaagggctggcaggccgtcaaatccggc
gcaatggcaaccgacacggttgtgaataccggcgcggaagggggaccggatgcagaaaat
ggtgataccgggcagtttgttcgcggaaatgccgtacgtaccactatcaatgagaatggt
cgtcagattgtggctgctgaaggaacggcaaataccactgtggtttatgccggcggcgac
cagactgtacatggctacgcgctggataccacactgaacggcggtaaccagtatgtgcac
aacggcggtacagcgtctggcactgttgtgaacagtgacggctggcagattgtcaaggaa
ggtggtctggcggatttcaccatcgttaaccagaaaggcaaactgcaggtgaacgccggt
ggtacagccacgaatgtcaccctgaagcagggaggcgcactggtcaccagtacggcggca
accgtcaccggcagcaaccgtctgggcaatttcacagtggaaaacggtaatgctgacggt
gttgttctggagtccggtggtcgcctggatgtactggagggccattcagcctggaaaaca
ctggtggatgacggcggtaccctggcagtgtctgccggtggtaaggcaacagatgtcacc
atgacatccggtggtgccctgatagcagacagtggtgccactgttgaggggaccaatgcc
agcggtaagttcagtattgatggcatatccggtcaggccagcggcctgctactggaaaat
ggcggcagctttacggttaatgccgggggacaggcaggcaacaccactgtcggacatcgt
ggaacactgacgctggctgccgggggaagtctgagtggcagaacacagctcagtaaaggc
gccagtatggtactgaatggtgatgtggtcagtaccggcgatattgttaacgcaggagag
attcactttgataatcagacgacacaggatgccgtgctgagccgtgctgttgcaaaaggc
gactccccggtaacgttccataaactgaccaccaccaacctcactggtcagggcggcacc
atcaatatgcgtgttcgccttgatggcagcaatacctctgaccagctggtgattaatggt
ggtcaggcaaccggcaaaacctggcttgcgtttacaaatgtcggaaacagtaacctcggg
gtggcaacctccggacagggtaccctgcacagtgacgccctgtttcggcgcccgtctggt
gcaggagggtaa
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