Escherichia coli O9 HS (commensal): EcHS_A2209
Help
Entry
EcHS_A2209 CDS
T00591
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ecx
Escherichia coli O9 HS (commensal)
Pathway
ecx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EcHS_A2209 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecx03400
]
EcHS_A2209 (alkA)
Enzymes [BR:
ecx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
EcHS_A2209 (alkA)
DNA repair and recombination proteins [BR:
ecx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EcHS_A2209 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ABV06493
UniProt:
A0A7I6H6N5
LinkDB
All DBs
Position
complement(2190934..2191782)
Genome browser
AA seq
282 aa
AA seq
DB search
MYTLNWQPPYDWSWMLGFLAARAVSGVETVADSYYARSLAVGEYRGVVTAIPDIARHTLH
INLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRA
ILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAE
ALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtataccctgaactggcagccgccgtatgactggtcgtggatgttgggatttctcgcc
gcccgtgcggtgagcggtgtggaaacggtcgcggacagttattatgcccgtagtctggcg
gtgggcgaatatcgcggcgtggtgactgctattccggatatagcccgccatactctgcac
ataaatttaagtgcaggtttagaacctgttgccgcagagtgtctggcgaaaatgagccgc
ctgtttgatctgcaatgtaacccacaaattgttaacggtgcgttgggcaggttaggcgcg
gcgcggcccggattgcgtttacccggctgtgttgatgcttttgagcagggcgtgcgggcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgaccgccagagtggcacag
ctttatggcgaacggctggatgattttccggagtatatctgcttcccgacgcctcagcgg
ctggcagcagcagacccgcaggcattaaaagcgttaggtatgccgttgaaacgggcagag
gcgctgattcatctggcaaatgcggcgctggagggcaccttaccaatgacaataccgggc
gatgtggagcaggcgatgaaaacgctgcaaacttttccgggtatcgggcgctggacggcg
aattattttgctttgcgtggctggcaggcgaaagatgttttcctgccggatgattatctg
attaaacagcgatttccgggaatgacaccggcgcaaatccgccgttatgccgagcgctgg
aagccctggcgttcttatgcgctgttgcatatctggtatacggaaggctggcaaccagac
gaagcatga
DBGET
integrated database retrieval system
