Escherichia coli O9 HS (commensal): EcHS_A2322
Help
Entry
EcHS_A2322 CDS
T00591
Name
(GenBank) putative helicase
KO
K19789
DNA repair protein RadD
Organism
ecx
Escherichia coli O9 HS (commensal)
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecx03400
]
EcHS_A2322
DNA repair and recombination proteins [BR:
ecx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
EcHS_A2322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
SLFN-g3_helicase
AAA_16
zf-tcix
AAA_22
AAA
DUF7577
TerL_ATPase
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
ABV06601
LinkDB
All DBs
Position
2322810..2324570
Genome browser
AA seq
586 aa
AA seq
DB search
MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYQALGLEADIFAAGLKRKESHVKVVFGSVQSVARNLDAFQGEFSLLIVDECH
RIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH
IISQIMEFAATRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGAERDVLIENFKAQR
FRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMS
LQHGHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITA
ADILAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRLAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatttttacacttcgcccatatcagcaagaagccgtggatgccacgctcaaccatttt
cgtcgtcataaaacccctgccgttatcgtgctgcccaccggcgcaggtaaaagcctggtg
atagcggaactggcacggctggctcgtggtcgcgtgctggtgctggcacacgttaaagaa
ctggtggcgcaaaaccatgcaaagtatcaggcgctggggctggaagccgatatttttgcc
gccgggctaaagcgcaaagagagccacgttaaagtggtatttggcagcgtgcagtctgtc
gcccgtaatcttgatgcctttcagggtgaattttcgctgttgattgtcgatgaatgtcac
cgtattggtgacgatgaagagagccagtatcagcaaatcctcactcacctgacaaaagtg
aatccccacttacgcctgctggggctgactgccacgccttttcgattgggcaaaggctgg
atctaccagtttcattatcacggcatggtacgcggcgatgagaaagcccttttccgtgac
tgcatttatgagctgccgctgcgttatatgattaaacacggctatctgacgccgccagaa
cgactggatatgccagtagtgcaatacgatttcagccgcttgcaggcacagagtaacggg
ctgttcagcgaagccgatctcaaccgtgagctgaaaaaacaacaacgtattaccccgcac
atcatcagccagattatggagtttgctgcaacgcgcaaaggggtgatgatttttgccgcg
acggttgaacacgcaaaagagattgtgggattactgcctgccgaagatgcagcactgatt
actggcgacacccccggcgctgagcgcgatgtgttaattgaaaattttaaagcccagcgt
tttcgctatctggtcaacgtcgcggtactgaccaccggatttgacgccccgcacgtcgat
cttatcgccattctgcgccctaccgaatcagtgagtctttaccaacaaattgtcgggcgc
ggtctgcgtctcgctccgggcaagactgattgcttaattcttgattatgcgggtaatcct
cacgatctctacgcgccggaagttggtacaccaaaaggcaaaagtgacaacgttccggta
caggttttctgccctgcctgcggttttgccaacaccttttgggggaaaacgaccgccgac
gggacattgattgaacactttggtcgtcgctgtcagggatggtttgaagatgacgacggt
catcgcgaacaatgtgacttccgtttccgttttaaaaattgcccgcaatgtaacgcggaa
aacgatattgccgcccgccgctgccgcgaatgtgacaccgtactggttgatccggacgat
atgttaaaagcggcgctacgactgaaagacgcgctggtattacgctgtagcggcatgtct
ttgcaacatgggcacgacgagaaaggcgaatggttgaaaatcacctattacgatgaagac
ggcgcggatgtgagtgagcgtttccgtctgcaaacacctgcccagcgtaccgccttcgag
cagctttttatccgcccgcatacgcgcacaccgggcatcccgctgcgctggatcaccgcc
gccgatatcctcgcccagcaagccttattgcgacacccggattttgtcgtcgcccgcatg
aaaggccagtactggcaggtgcgtgaaaaagtgttcgattacgaaggtcgttttcgtctg
gcgcacgaattacgcggttaa
DBGET
integrated database retrieval system
