Escherichia coli O9 HS (commensal): EcHS_A2414
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Entry
EcHS_A2414 CDS
T00591
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ecx
Escherichia coli O9 HS (commensal)
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecx03016
]
EcHS_A2414 (rnz)
Enzymes [BR:
ecx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
EcHS_A2414 (rnz)
Transfer RNA biogenesis [BR:
ecx03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
EcHS_A2414 (rnz)
Prokaryotic type
EcHS_A2414 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ABV06690
UniProt:
A8A2D6
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All DBs
Position
2422395..2423312
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AA seq
305 aa
AA seq
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MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPGKLDKI
FISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVE
IGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKA
GKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITME
AKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFPATELANDF
TVFNV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaattaatttttttaggtacttcagccggtgtgccaacccgcacgcgcaatgtcacg
gcaatattgcttaacctgcaacatccgacccagagcggactttggttgtttgactgcggt
gaaggcacccagcatcagctactgcataccgcctttaaccctggaaaactggacaagatt
tttatcagtcaccttcatggcgatcatctttttggtttacccggcttgctgtgcagtcgt
tctatgtcaggcattatccaacccttaacgatttatggtccgcaaggtatccgtgaattt
gtggaaaccgcgctgcggattagcggctcatggaccgattatccgctggaaattgtcgaa
attggcgctggcgaaattctcgatgatggcctgcgcaaagtaaccgcttatccgctggaa
cacccactggaatgttatggctatcgtattgaagaacatgataaaccgggtgcattaaat
gcccaggcattaaaagctgctggcgtgccgcctggcccactgtttcaggaattaaaagcg
ggcaaaacaatcacgctggaagatggaaggcagattaacggcgcagattacttagctgct
ccagtgccaggtaaagcgctcgctattttcggcgataccggcccctgcgatgccgcactt
gacctggctaaaggtgtcgatgtcatggtgcacgaagcgacgctggatataaccatggaa
gccaaagccaatagtcgcggccatagctctacacgccaggctgcgacactagcccgtgag
gctggagtcggcaagctaatcattacccacgtcagctcgcgctatgatgacaaaggttgt
cagcacctgttacgtgaatgcaggtcaattttcccggcgactgaactggcgaatgatttc
accgtgtttaacgtttaa
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