Escherichia coli O9 HS (commensal): EcHS_A2722
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Entry
EcHS_A2722 CDS
T00591
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ecx
Escherichia coli O9 HS (commensal)
Pathway
ecx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EcHS_A2722 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecx03019
]
EcHS_A2722 (rnc)
03009 Ribosome biogenesis [BR:
ecx03009
]
EcHS_A2722 (rnc)
03036 Chromosome and associated proteins [BR:
ecx03036
]
EcHS_A2722 (rnc)
Enzymes [BR:
ecx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EcHS_A2722 (rnc)
Messenger RNA biogenesis [BR:
ecx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EcHS_A2722 (rnc)
Ribosome biogenesis [BR:
ecx03009
]
Eukaryotic type
90S particles
RNase
EcHS_A2722 (rnc)
Prokaryotic type
rRNA processing factors
EcHS_A2722 (rnc)
Chromosome and associated proteins [BR:
ecx03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EcHS_A2722 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ABV06981
UniProt:
A8A377
LinkDB
All DBs
Position
complement(2741719..2742399)
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AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gaactgttgcagcaggcattaactcatcgtagtgccagcagtaaacataacgagcgttta
gaatttttaggcgactctattctgagctacgttatcgccaatgcgctttatcaccgtttc
cctcgtgtggatgaaggcgatatgagccggatgcgcgccacgctggtccgtggcaatacg
ctggcggaactggcgcgcgaatttgagttaggcgagtgcttacgtttagggccaggtgaa
cttaaaagcggtggatttcgtcgtgagtcaattctcgccgacaccgtcgaagcattaatt
ggtggcgtattcctcgatagtgatattcaaaccgtcgagaaattaatcctcaactggtat
caaactcgtttggacgaaattagcccaggcgataaacaaaaagatccgaaaacgcgcttg
caagaatatttgcagggtcgccatctgccgctgccgacttatctggtagtccaggtacgt
ggcgaagcgcacgatcaggaatttactatccactgccaggtcagcggcctgagtgaaccg
gtggttggcacaggttcaagccgtcgtaaggctgagcaggctgccgccgaacaggcgttg
aaaaaactggagctggaatga
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