Escherichia coli O9 HS (commensal): EcHS_A3051
Help
Entry
EcHS_A3051 CDS
T00591
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ecx
Escherichia coli O9 HS (commensal)
Pathway
ecx03410
Base excision repair
ecx03430
Mismatch repair
ecx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EcHS_A3051 (recJ)
03430 Mismatch repair
EcHS_A3051 (recJ)
03440 Homologous recombination
EcHS_A3051 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecx03400
]
EcHS_A3051 (recJ)
DNA repair and recombination proteins [BR:
ecx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EcHS_A3051 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EcHS_A3051 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EcHS_A3051 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Motif
Other DBs
NCBI-ProteinID:
ABV07287
LinkDB
All DBs
Position
complement(3063886..3065619)
Genome browser
AA seq
577 aa
AA seq
DB search
MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA
VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE
VVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGETLPAAEAIINPNLR
DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPL
DANNRILTWQGMSRIRAGKCCPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQVEALTLCEKLERSRDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GMILKFGGHAMAAGLSLEEDKFELFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTME
VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA
LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacaacttcgtcgccgtgaagtcgatgaaacggcagacttgcccgct
gaattgcctcccttgctgcgccgtttatacgccagccggggcgtgcgcagtgcgcaagaa
ctggaacgcagtgttaaaggtatgttgccctggcagcaactgagcggcgtcgaaaaggcc
gttgagatcctttacaacgcttttcgcgaaggaacgcggattattgtggtcggcgatttt
gacgccgacggcgcgaccagcacggctctaagcgtgctggcgatgcgctcgcttggttgc
agcaatatcgactatctggtaccaaaccgtttcgaagacggttacggcttaagcccggaa
gtagtcgatcaggcccatgcccgtggcgcgcagttaattgtcacggtggataacggtatt
tcctcccatgcgggcgttgaacacgctcgctcgttgggcattccggttattgttaccgat
caccatttgccgggcgaaacattacccgcagcggaagcgatcattaaccctaacttgcgc
gactgtaatttcccgtcgaaatcactggcaggcgtgggtgtggcgttttatctgatgctg
gcgctgcgcacctttttgcgcgatcagggctggtttgatgagcgtggcatcgcaattcct
aacctggcagaactgctggatctggtcgcgctgggaacagtggcggacgtcgtgccgctg
gacgctaataatcgcattctgacctggcaggggatgagtcgcatccgtgccggaaagtgc
tgtccagggattaaagcgctgctggaagtggcaaaccgtgatgcacaaaaactcgccgcc
agcgatttaggttttgcgctggggccacgtctcaatgctgccggacgactggacgatatg
tccgtcggtgtggcgctcttgctgtgcgacaacatcggcgaagcgcgcgtgctggcaaat
gaactcgatgcgctaaaccagacgcgaaaagagatcgaacaaggaatgcaagttgaagcc
ctgaccctgtgcgagaaactggagcgaagtcgcgacacgctacccggcgggctggcaatg
tatcaccccgaatggcatcagggcgttgtcggtattctggcttcgcgcatcaaagagcgt
tttcaccgtccggttatcgcctttgcgccagcaggtgatggtacgctgaaaggttcaggt
cgctccattcaggggctgcatatgcgtgatgcactggagcgattagacacactctaccct
ggcatgatactgaagtttggcggtcatgcgatggcggcgggtttgtcgctggaagaggat
aaattcgaactctttcaacaacggtttggcgagctggttaccgagtggctggacccttcg
ctattgcaaggcgaagtggtgtcagacggcccgttaagcccggccgaaatgaccatggaa
gtggcgcagctgctgcgcgatgctggcccgtgggggcagatgttcccggagccgctgttt
gatggtcatttccgtctgctgcaacagcggctggtgggcgaacgtcatttgaaagtcatg
gtcgaaccggtcggcggcggtccgctgctggatggtattgcttttaatgtcgataccgcc
ctctggccggataacggcgtgcgcgaagtgcaactggcttacaagctcgatatcaacgag
tttcgcggcaaccgcagcctgcaaattatcatcgacaatatctggccaatttag
DBGET
integrated database retrieval system
