Escherichia coli O9 HS (commensal): EcHS_A3142
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Entry
EcHS_A3142 CDS
T00591
Name
(GenBank) conserved hypothetical protein
KO
K10939
accessory colonization factor AcfD
Organism
ecx
Escherichia coli O9 HS (commensal)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
TonB_N
CooC_C
Motif
Other DBs
NCBI-ProteinID:
ABV07377
UniProt:
A0A7I6H947
LinkDB
All DBs
Position
complement(3151413..3155924)
Genome browser
AA seq
1503 aa
AA seq
DB search
MSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPIPD
PEPTPEPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFKPGEDVTCVAGNTTIATF
NTQSEAARSLRAVEKVSFSLEDAQELAGSDDKKSNAVSLVTSSNSCPANTEQVCLTFSSV
IESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSPVVPVTTPGTKPDLNAS
FVSANAEQFYQYQPTEIILSEGRLVDSQGYGVAGVNYYTNSGRGVTGENGEFSFSWGETI
SFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQNNTRVVPDDVRKVFA
EYPNVINEIINLSLSNGATLGEGEQVVNLPNEFIEQFNTGQAKEIDTAICAKTDGCNEAR
WFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNFYGSTGNARGQAVVNISN
AAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVRPENVTRETATFNLPFISLGQ
VGDGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDMKNFMENVLRYLSNDR
WLPDAKSNMTVGTNLDTVYFKKHGQVTGNSAAFGFHPDFAGISVEHLSSYGDLDPQEMPL
LILNGFEYVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAYMNKGGSVLIMENVMSNLKE
ESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRSTPIWVYERYPAVDGKPPYTI
DDTTKEVIWKYQQENKPDDKPKLEVASWQEEVEGKQVTQFAFIDEADHKTPESLAAAKKR
ILDAFPGLEECKDSDYHYEVNCLEYRPGTGVPVTGGMYVPQYTQLSLNADTAKAMVQAAD
LGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWNKIEYRYENDKDDELGFK
TFTEFLNCYANNAYDGGTQCSAELKQSLIDNKMIYGEGSKAGMMNPSYPLNYMEKPLTRL
MLGRSWWDLNIKVDVEKYPGAVSAEGEEVTETINLYSNPTKWFAGNMQSTGLWAPAQQEV
SIKSNAKVPVTVTVALADDLTGREKHEVALNRPPRVTKTYSLDASGTVKFKVPYGGLIYI
KSDSKEEKSANFTFTGVVKAPFYKDGKWKNDLKSPAPLGELESASFVYTTPKKNLEASNY
KGGLKQFAEDLDTFASSMNDFYGRDGESGKHRMFTYEALTGHKHRFTNDVQISIGDAHSG
YPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYL
GKMNRVADDITVAPEYLEESNGQAWARGGAGDRLLMYAQLKEWAEKNFDIKQWYPEGSLP
AFYSEREGMKGWNLFQLMHRKARGDDVGNDKFGNRNYCAESNGNAADTLMLCASWVAQTD
LSAFFKKWNPGANAYQLPGATEMSFEGGVSQSAYNTLASLDLPKPKQGPETINKVTEYSM
PAE
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgcaaccctgttagccggttgtgatggcggtggttccggatcttcctccgatacg
ccgcctgtagattctggaacaggatctttgccggaagtgaaacctgatccaacaccaaac
ccggagccgacgcctgagccaacgccggacccagagcctacgccagaaccgatacctgat
cctgaaccaacaccagaaccggagccagaacctgttcctacgaaaacgggttatctgacc
ctgggcggaagccagcgggtaactggtgctacctgtaatggtgaatccagcgatggcttt
acatttaaacctggcgaggacgttacttgcgtggcgggtaacacgacaattgccaccttc
aacactcagtcagaagctgcgcgtagcttgcgtgcggttgaaaaagtgtcgtttagcctt
gaggacgcgcaagaactggcgggctccgatgacaagaaaagcaatgcggtttcgctggta
acgtccagtaacagctgtccggcgaatacagaacaggtttgtctgacgttctcctcggtg
atcgagagtaaacgcttcgactcgctgtataagcaaatcgatctggcaccggaagagttc
aaaaagctggtcaatgaagaggtggaaaacaatgctgcgaccgataaagcgccatccact
catacttcaccggtcgtgcccgtcaccacgccgggaacaaaaccggatctgaacgcttcc
ttcgtgtcggctaacgcggaacagttttatcagtatcaacccactgaaatcattctctct
gaaggtcgactggtcgatagccagggatatggtgttgctggcgtcaactactacaccaat
tcaggccgtggcgtgacaggggaaaatggtgaattttcctttagctggggcgaaaccatc
tcctttggtatcgatacctttgaactgggttcagtgcgcggcaataagtcgaccattgcg
ctgactgaactgggtgatgaagttcgcggggcgaatattgatcagcttattcatcgctat
tcgacgaccgggcaaaataatacccgtgttgttccggacgatgtacgcaaggtctttgcc
gaatatcccaacgtgatcaacgagattatcaatctctcgttatccaacggtgcgacgctg
ggggaaggtgagcaagtcgttaatctgcctaacgaatttattgagcagtttaatacgggt
caggccaaagagatcgataccgcgatttgtgcgaaaaccgatggttgtaacgaggctcgc
tggttctcgctgacgacgcgcaatgttaatgacggccagattcagggcgttatcaacaag
ctgtggggcgtggatacgaactacaaatctgtcagcaagttccatgtattccatgactcc
accaacttctatggcagcacgggtaatgcgcgcggtcaggcggtggtgaatatctccaac
gcggccttcccgattctgatggcgcgtaatgataaaaactactggctggccttcggcgag
aaacgggcctgggataaaaatgagctggcgtacattactgaagcgccttccattgtgcga
ccagagaacgtgacacgcgaaaccgccaccttcaacctgccgtttatttcgctggggcaa
gtgggcgatggcaagctgatggttatcggtaacccacactacaacagcatcctgcgttgc
ccgaacggttacagctggaacgggggcgttaataaagatgggcagtgtacgctcaacagc
gacccggatgacatgaagaacttcatggagaacgtgctgcgctatctgtcaaatgatcgc
tggttgccggatgcaaaatccaatatgaccgtgggtactaacctggacacggtgtatttc
aaaaaacacgggcaggttacaggaaatagtgctgcgttcggctttcatccggattttgcg
ggtatctctgttgagcatttaagtagctatggcgatctcgacccgcaggaaatgccgctg
ctgatcctcaacggctttgagtatgtgactcaggttggtaacgatccttatgcaatcccg
ctgcgtgcagataccagcaaaccgaagctgacccagcaggatgtgaccgatttgatcgcc
tatatgaacaaaggtggatcggtgctgatcatggaaaacgtgatgagcaatcttaaggaa
gagagcgcatctggctttgtacgtctgcttgatgccgcaggtttgtcgatggcgcttaac
aagtcggtagtaaataacgatccgcaaggctacccggaccgcgttcgtcaacgacgttca
acgccaatttgggtctatgagcgttatccggctgtcgatggtaaaccaccgtataccatt
gatgacaccacgaaagaagttatctggaaatatcagcaagaaaacaaacctgatgacaaa
ccgaagctggaagttgccagctggcaggaagaagttgagggtaaacaggtaactcaattc
gcctttatcgatgaagccgaccacaaaacgcctgagtcactggctgcggcgaagaagaga
attctggacgcgttcccagggctggaagagtgtaaggattctgactaccactatgaggtc
aactgtctggaatatcgtcctggcacgggggttccggttactggtggcatgtatgttcca
cagtatacgcaactaagccttaacgccgacactgcgaaagcgatggtgcaggctgcggat
ttaggcaccaacattcagcgtctgtatcagcatgagctttacttccgtaccaatggtcgc
aaaggtgagcgtctgagcagcgtcgatctggaacgtctgtaccagaacatgtcggtctgg
ctgtggaataaaattgaatatcgctatgaaaacgacaaggatgacgagctgggctttaaa
acgttcaccgagttcctgaactgttacgccaacaatgcttatgatggtggcacgcagtgc
tccgcagagctgaaacaatcgctgatcgataacaagatgatctacggtgaaggcagcaaa
gcgggcatgatgaacccgagctacccgcttaactatatggaaaaaccgctgacgcgcctg
atgctggggcgttcctggtgggatctgaacatcaaggttgatgtcgagaagtatccgggg
gcggtatcggctgaaggtgaggaggttactgaaaccatcaacctgtactcgaatccgacc
aaatggtttgcgggtaacatgcagtctactggcctgtgggctccggctcagcaggaagtc
agcattaagtccaatgcgaaagtccctgtgactgttaccgtggcgctggctgacgacctg
accgggcgtgagaagcatgaggttgcgctgaaccgtccgccaagagtgactaaaacatac
tctctggatgctagcggcacggtgaagttcaaggttccttacggtggtctgatttatatc
aagagcgacagtaaagaggagaaatcagccaacttcacctttactggcgtggtaaaagcg
ccgttctataaagacggtaaatggaaaaacgacctgaaatcccctgcgccgttgggtgag
ctggagtctgcgtcgttcgtctataccacgccgaagaagaaccttgaggccagcaattac
aagggcggtctgaaacaattcgctgaggatctggatacctttgccagctcgatgaatgac
ttctacggtcgtgatggcgaaagcggtaagcaccggatgtttacctatgaagcattgacg
gggcacaaacatcgtttcaccaacgatgtgcagatctccatcggtgatgcgcactctggt
tatccggtgatgaacagcagcttctcgccgaacagcaccacgctgccgacgacgccgctg
aacgactggctgatctggcacgaagtagggcacaacgctgcagaaacgccgctgactgta
ccgggcgcaactgaagtggcgaacaacgtgctggcgctgtacatgcaggatcgttatctc
ggcaagatgaaccgtgtcgctgacgatattaccgttgcgccggaatatctggaggagagc
aacggtcaggcatgggcgcgtggcggtgcgggtgaccgtctgctgatgtacgcgcagctg
aaggaatgggcagagaaaaactttgatatcaaacagtggtatccagaaggctctctgcca
gcgttctacagcgagcgtgaagggatgaaaggctggaacctgttccagttgatgcaccgt
aaagcacgcggcgatgatgttggcaatgacaaatttggcaacagaaactactgtgccgaa
tccaacggtaacgctgccgacacgctgatgctgtgtgcatcctgggtcgctcagacggac
ctttccgcattctttaagaaatggaatccgggcgcgaatgcttaccagttgccgggagcg
acagagatgagcttcgagggcggtgtgagccagtcggcttacaacacgctcgcgtcactc
gatctgccgaaaccgaagcaagggccggaaaccattaacaaggttaccgagtattcgatg
cctgctgaataa
DBGET
integrated database retrieval system