Escherichia coli O9 HS (commensal): EcHS_A3830
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Entry
EcHS_A3830 CDS
T00591
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ecx
Escherichia coli O9 HS (commensal)
Pathway
ecx00541
Biosynthesis of various nucleotide sugars
ecx01100
Metabolic pathways
ecx01250
Biosynthesis of nucleotide sugars
Module
ecx_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EcHS_A3830 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecx01005
]
EcHS_A3830 (rfaD)
Enzymes [BR:
ecx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
EcHS_A3830 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ecx01005
]
Core region
EcHS_A3830 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
ABV08037
UniProt:
A8A683
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All DBs
Position
3825542..3826474
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLIQI
MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNKGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVM
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaaggccctgaat
gataaaggcatcaccgatattctggtggtggacaacctgaaagacggcaccaagtttgtg
aacctggtggatctggatatcgcggactatatggataaggaagacttcctgatccagatt
atggctggcgaagagttcggcgatgtcgaagcgattttccacgaaggcgcatgctcttcc
accaccgagtgggacggcaagtatatgatggataacaactatcaatactccaaggagctg
ctgcactactgcctggagcgcgaaatcccgttcctgtacgcttcttccgcagccacctac
ggcggacgcacctccgactttattgaatcccgcgagtacgaaaaaccgttgaacgtctac
ggttactcaaaattcctgtttgatgaatatgttcgccaaatcctgcctgaagcgaactcg
cagattgttggcttccgctatttcaacgtttatggaccgcgtgaaggccataaaggcagc
atggcgagcgtcgctttccatctcaacactcagcttaacaaaggtgaatcaccgaagctg
tttgaaggtagcgagaacttcaaacgtgacttcgtctatgtgggcgacgtggcagatgta
aacctgtggttcctggaaaatggcgtttccggtatcttcaacctcggtactggtcgtgcg
gaatccttccaggccgtagcagatgctactctggcttatcacaagaaaggccagatcgaa
tacattccgttcccggataagctgaaaggccgctaccaggcgttcactcaggcagatctg
acaaatctgcgcgcggcgggttacgacaaaccgttcaaaaccgttgctgaaggtgtaatg
gaatacatggcctggctgaatcgcgacgcataa
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