Escherichia coli O9 HS (commensal): EcHS_A4370
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Entry
EcHS_A4370 CDS
T00591
Symbol
lysS1
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ecx
Escherichia coli O9 HS (commensal)
Pathway
ecx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EcHS_A4370 (lysS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecx01007
]
EcHS_A4370 (lysS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecx03016
]
EcHS_A4370 (lysS1)
Enzymes [BR:
ecx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
EcHS_A4370 (lysS1)
Amino acid related enzymes [BR:
ecx01007
]
Aminoacyl-tRNA synthetase
Class II (A)
EcHS_A4370 (lysS1)
Transfer RNA biogenesis [BR:
ecx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
EcHS_A4370 (lysS1)
Prokaryotic type
Other AARSs
EcHS_A4370 (lysS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF2333
Motif
Other DBs
NCBI-ProteinID:
ABV08530
LinkDB
All DBs
Position
complement(4377222..4378739)
Genome browser
AA seq
505 aa
AA seq
DB search
MSEQETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDHTSDQLHEEFDAKDNQE
LESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGD
IIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKS
RQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRT
LAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGI
TVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG
REIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGID
RMIMLFTNSHTIRDVILFPAMRPQK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaagaaacacggggagccaatgaggctattgattttaacgatgaactgaga
aatcgccgcgaaaaactggcggcactacgtcagcaaggtgtggcgtttcccaatgatttt
cgccgcgaccatacctctgaccagctgcacgaagagtttgatgcgaaggataaccaggaa
ctggaatccttaaacattgaagtctcggttgctggccgaatgatgacccgtcgtatcatg
gggaaagcctcctttgtaacgttgcaggatgtcggtggccgtattcaactgtacgttgca
agagatagcctgccagaaggtgtttataacgatcagtttaaaaaatgggatctgggtgac
attatcggtgcccgcggtacgctgtttaagacgcaaaccggtgagctttccattcactgt
actgagttgcgcctgctgacaaaagcactacgtcctttaccagataaattccatggtctg
caggatcaggaagtccgttatcgtcaacgttatctggacctcatcgctaacgataaatcc
cgacaaacgtttgttgtccgttcaaaaattctggccgctatccgtcagttcatggtcgcg
cgcggctttatggaagtagaaaccccgatgatgcaggtaattccaggtggggcatctgct
cgcccgtttattacccatcataatgctctggatttagatatgtatctgcgtatcgcgccg
gagctgtatctgaaacgtctggttgtaggcggttttgaacgggtattcgaaatcaaccgt
aacttccgtaatgaaggtatttctgttcgccataatcctgagttcacaatgatggaactc
tacatggcgtatgcggattaccacgatttgattgaactgacagagtcactgttccgcacc
ctggcacaagaggttctgggtaccactaaagtcacttatggcgagcatgtgtttgatttc
ggcaaaccgtttgaaaaactcaccatgcgcgaagcaatcaaaaaatatcgtccagaaacc
gatatggccgacctggataattttgatgctgctaaagcattagctgaatctatcggaatt
acggtagagaaaagctgggggctgggacgtattgtcacggagatctttgatgaagtggca
gaagcacatctgattcagccaacctttattacggaatatccggcagaagtgtccccgctg
gcgcgccgtaatgatgttaacccggaaatcaccgaccgttttgaattcttcatcggtggt
cgtgaaatcggtaatggttttagcgaattaaacgacgcagaagatcaggctgaacgtttc
caggaacaggttaacgctaaagctgcaggtgacgacgaagccatgttctatgacgaagat
tacgtgactgcgctggaatatggtctgccgccaaccgctggtctgggtattggcatcgac
cgaatgattatgctgtttacaaacagtcatactattcgtgacgttattctcttcccggcg
atgcgcccacagaaataa
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