Escherichia coli O152 H28 SE11 (commensal): ECSE_2029
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Entry
ECSE_2029 CDS
T00784
Name
(GenBank) putative transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ecy
Escherichia coli O152:H28 SE11 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecy03000
]
ECSE_2029
Transcription factors [BR:
ecy03000
]
Prokaryotic type
Helix-turn-helix
Other families
ECSE_2029
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
BAG77553
UniProt:
A0A979GFR4
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Position
2107725..2108594
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AA seq
289 aa
AA seq
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MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAALALEANVSEPTVNRFCRSMDT
RGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKSAINR
AVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVV
LISHTGRTKNLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSR
LAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKQLLNLSDDR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgctggaaaaaatccagtctcagctggaacatttgagcaaatcagagcgcaaa
gttgccgaggtcattctggcttcgcccgataacgcgatccattcgagtattgctgctctg
gcgctggaagccaatgttagcgaaccgacggtgaatcgtttctgtcgcagcatggacacg
cgcggttttcctgattttaaacttcatctggcacaaagtctggcgaatggcactccctat
gttaatcgcaatgtcaatgaagatgacagcgttgaatcatacacagggaaaatatttgag
tccgcaatggcaacgcttgatcatgtccgtcattcactggataaatctgccatcaaccgc
gccgtcgacttgctcactcaggcaaaaaaaatcgcctttttcggattaggctcttcagcc
gccgttgcccacgatgcgatgaataagttctttcgttttaatgttccggtggtgtactcc
gatgatatcgtgctgcaacgcatgagttgtatgaattgtagcgacggagacgtggtggtg
ctgatttctcacactggaagaacaaaaaatctggtcgagctggcgcagctggctcgcgaa
aacgacgcaatggtgattgccctcacctctgcgggtaccccgctcgcccgggaagcaacg
ctggcaattaccctcgacgtaccggaagatactgacatttatatgcccatggtttctcga
cttgcacagctgaccgtgatagatgtgctggcgacaggatttactttgcgacgcggtgca
aaattcagagataacttgaagcgggtcaaggaagcgctgaaggaatcgcgttttgataag
cagttacttaatttaagtgacgatcgctaa
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