Escherichia coli O152 H28 SE11 (commensal): ECSE_3249
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Entry
ECSE_3249 CDS
T00784
Name
(GenBank) conserved hypothetical protein
KO
K10939
accessory colonization factor AcfD
Organism
ecy
Escherichia coli O152:H28 SE11 (commensal)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
PQQ
CooC_C
Motif
Other DBs
NCBI-ProteinID:
BAG78773
UniProt:
A0A979GH47
LinkDB
All DBs
Position
complement(3373686..3378254)
Genome browser
AA seq
1522 aa
AA seq
DB search
MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTP
EPTPDPEPTPEPTPDPEPTPEPEPEPVPTKTGYLTLGGSLRVTGDITCNDESSDGFTFTP
GDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVSFSLEDAQELAGSDNKKSNALSLVTSM
NSCPANTEQVCLEFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTS
PVVPVTTPGTKPDLNASFVSANAEQFYQYQPSEIILSEGRLVDSQGYGVAGVNYYTNSGR
GVTGENGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTT
GQNNTRVVPDDVRKVFAEYPNVINEIINLSLSNGATLDEGEQVVNLPNEFIEQFKTGQAK
EIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNF
YGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSLVEPEN
VTRDTATFNLPFISLGQVGEGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPD
DMKNFMENVLRYLSDDKWTPDAKASMTVGTNLDTVYFKRHGQVTGNSAAFDFHPDFAGIS
VEHLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAYLN
KGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPNRVRQQRATGI
WVYERYPAVDGALPYTIDSKTGEVKWKYQVENKPDDKPKLEVASWLEDVDGKQETRYAFI
DEADHKTEDSLKAAKEKIFAAFPGLKECTNPAYHYEVNCLEYRPGTGVPVTGGMYVPQYT
QLSLNADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWN
DTSYRYEEGKNDELGFKTFTEFLNCYANDAYAGGTKCSADLKKSLVDNNMIYGDGSSKAG
MMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSEEGQNVTETISLYSNPTKW
FAGNMQSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTGREKHEVALNRPPRVTKTYSL
DASGTVKFKVPYGGLIYIKGNSSTNESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELE
SDAFVYTTPKKNLNASNYTGGLKQFANDLDTFASSMNDFYGRDETSGKHRMFTYKALTGH
KHRFTNDVQISIGDAHSGYPVMNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPG
ATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQAWARGGAGDRLLMYAQLKE
WAEKNFDIKKWYPDGTPLPEFYSEREGMKGWNLFQLMHRKARGDEVSNDKFGGKNYCAES
NGNAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGATEMSFEGGVSQSAYNTLASLN
LPKPKQGPETINKVTEYSMPAE
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaatttaaatataagaaatcgcttttagcggctattttgagtgcaaccctg
ttagccggttgtgatggcggtggctccggatcttcctccgatacgccgcctgtagattct
ggaacagggtctttgccggaagtgaaacctgatccaacaccaaacccggagccgacgcct
gagccaacgccggacccagaacctacaccggaaccgacacctgatcctgagccaacacca
gaaccggagccagaacctgttcctacgaaaacgggttatctgaccctgggcggaagcctg
cgggtaactggtgatatcacctgtaatgatgaatccagcgatggctttacctttacacca
ggcgacaaagtcacctgtgtggcagggaacaacacgacaattgctaccttcgacacccag
tcagaagctgcgcgtagcctgcgtgcggttgaaaaagtgtcgtttagtcttgaggacgcg
caagaactggcgggttccgacaacaagaaaagcaatgcgctctcgctggtcacctccatg
aacagttgcccggcgaatacagaacaggtgtgcctggagttctcctcggtgatcgagagt
aaacgtttcgactcgctgtataagcaaatcgatctggcaccggaagagttcaaaaagctg
gtcaatgaagaggtggaaaacaatgccgcgactgataaagcgccatccactcatacttca
ccggtagtccccgtcacgactccgggaacaaaaccggatctaaacgcctccttcgtgtcg
gctaacgcggaacagttttatcagtatcaaccttcggaaatcattctctcagaaggtcgc
ctggtggatagccagggatatggtgttgctggcgtcaactactacaccaattcaggccgt
ggcgtgacaggggaaaatggtgaattttcttttagctggggcgaaaccatctcctttggt
atcgatacctttgaactgggttcagtgcgcggcaataagtcgaccattgcgctgactgaa
ctgggtgatgaagttcgcggggcgaatatcgatcagcttattcatcgctattcgacgacc
gggcaaaataatacccgtgttgttccggatgatgtacgcaaggtctttgccgaatatccc
aacgtgattaacgagattatcaatctctcgttatccaacggtgcgacgctggatgaaggt
gagcaagttgttaatctgccaaacgaatttatcgagcagtttaagacgggtcaggccaaa
gagatcgataccgcgatttgtgcgaaaaccgacggttgtaacgaggctcgctggttctcg
ctgacgacgcgcaatgttaatgacggccagattcagggcgttatcaacaagctgtggggc
gtggatacgaactacaaatctgtcagcaagttccatgtattccatgactctactaacttc
tatggcagcacgggtaatgcgcgcggtcaggcggtggtgaatatctccaacgcggccttc
ccgattctgatggcgcgtaatgataaaaactactggctggcgtttggcgaaaaacgcgcc
tgggataaaaacgagctggcgtacattacggaagcgccttctcttgttgagccggaaaac
gttacgcgcgataccgccactttcaacctgccgtttatttcgctggggcaagtcggtgag
ggcaaactgatggttatcggaaacccacactacaacagcattttgcgttgcccgaacggt
tacagctggaacgggggcgttaataaagatgggcagtgtacgctcaacagcgacccggat
gacatgaagaacttcatggagaacgtgctgcgctatctgtccgacgataaatggacgccg
gacgcgaaagccagcatgaccgtaggcaccaacctagatactgtctattttaaacgtcat
ggtcaggttacaggaaacagcgctgcgttcgacttccatccggattttgcgggcatctct
gttgagcatttaagtagctatggcgatctcgatccgcaggaaatgccgctactgatcctt
aacggctttgaatatgtgactcaggtgggtaacgatccttatgcaatcccgctgcgtgca
gataccagcaaaccgaagctgactcagcaggatgtgaccgatctgatcgcctatctgaac
aaaggtggatcggtgctgatcatggaaaacgtgatgagcaatcttaaggaagagagcgcg
tctggttttgtgcgtctgttggatgccgcaggtctgtcgatggcactgaacaagtcggta
gtaaataacgatccgcaagggtatccgaaccgcgttcgtcagcagcgcgcaacgggcatt
tgggtctatgaacgttatcctgccgtagatggtgcgctgccgtacaccatcgatagtaag
acaggggaagttaagtggaaatatcaggtagaaaacaaacctgatgacaaaccgaagctg
gaagttgccagctggctggaagatgtagatggcaaacaggaaacgcgttatgcctttatt
gatgaggccgatcataaaacagaggattctctgaaggctgcgaaggagaaaattttcgcc
gcgttcccggggctgaaagagtgtactaatccggcatatcactatgaggtcaactgcctg
gaatatcgtcctggcacgggggttccggttactggtggcatgtatgttccacagtatacg
caactaagccttaacgccgacactgcaaaagcgatggtgcaggctgcggatttaggcacc
aacattcagcgtctgtatcagcatgagctctacttccggaccaatggtcgcaaaggtgag
cgtctgagcagcgtcgatctggaacgtctgtaccagaacatgtcggtctggctgtggaac
gatacgagctatcgttatgaagaaggcaaaaatgacgagctgggctttaaaacgttcacc
gagttcctgaactgctacgccaatgatgcctatgcaggcggcaccaagtgttctgcagat
ctgaaaaaatcgctggtcgataacaacatgatctacggtgacggtagcagcaaagcgggc
atgatgaacccgagctacccgctcaactatatggaaaaaccgctgacacgcctgatgctg
ggccgttcctggtgggatctgaacatcaaagttgatgtcgagaagtatccgggagcagta
tcggaagagggacagaacgttactgaaaccatcagcctgtactcgaatccgaccaaatgg
tttgcaggtaacatgcagtcaactggcctgtgggcaccggctcagaaagaggtcaccatt
aagtccaatgcgaacgttcctgtgaccgtcaccgtggcgctggctgacgacctgaccgga
cgtgagaagcatgaagttgcgctgaaccgtccgccaagagtgactaaaacgtactctctg
gacgctagcggtacggtgaagttcaaggtgccttacggtggcctgatttatatcaagggc
aatagctctaccaatgaatctgccagcttcacctttactggcgtggtaaaagcaccgttc
tataaagacggcgcatggaaaaacgatctgaactcaccggctccgctgggtgagctggaa
tcagacgctttcgtctataccacaccgaagaagaacctgaatgccagcaattacactggc
ggactgaagcaattcgctaacgatctggacacctttgccagctcgatgaatgacttctac
ggtcgtgatgaaacgagcggtaagcaccggatgtttacctataaagcattgacgggacat
aaacatcgtttcacaaacgatgtgcagatctccatcggtgatgcgcactcgggttatccg
gtaatgaacagcagcttctcgacgaacagcaccacgctgccgacgacgccgctgaacgac
tggctgatctggcacgaagtagggcacaacgccgcagaaacgccgctgactgttccaggc
gcgaccgaagtggcgaacaacgtgctggcgctgtacatgcaggatcgttatctcggcaag
atgaaccgtgtcgctgacgatattaccgtcgcaccggaatatctggaggagagcaacggt
caggcatgggcgcgcggcggtgcgggtgaccgtctgctgatgtacgcacagctgaaggaa
tgggcagagaaaaactttgatatcaagaaatggtatccagatggcactcctctgccagag
ttttacagcgagcgtgaagggatgaaaggctggaacctgttccagttgatgcatcgtaaa
gcacgcggcgatgaggtcagcaatgacaagtttggcggcaagaattactgtgctgaatcc
aacggtaacgcagcggacacgctgatgctgtgtgcctcctgggtcgcccagacggatctt
tcggagttctttaagaaatggaatccgggcgcgaatgcttaccagttgccgggagcgacg
gagatgagcttcgaaggcggtgtgagccagtcggcgtacaacacgctggcgtcactcaat
ctgccgaaaccgaagcaagggccggaaaccattaacaaggttaccgagtattcgatgcct
gctgaataa
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integrated database retrieval system
