Escherichia coli O152 H28 SE11 (commensal): ECSE_3688
Help
Entry
ECSE_3688 CDS
T00784
Name
(GenBank) transcriptional activator
KO
K14414
transcriptional regulatory protein RtcR
Organism
ecy
Escherichia coli O152:H28 SE11 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecy03000
]
ECSE_3688
Transcription factors [BR:
ecy03000
]
Prokaryotic type
Other transcription factors
Others
ECSE_3688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
NACHT
AAA_16
AAA_22
AAA_30
AAA_7
AAA_19
AAA_33
AAA_2
AAA_14
T2SSE
ATPase_2
ResIII
TsaE
MCM
NPHP3_N
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BAG79212
UniProt:
A0A979H3I4
LinkDB
All DBs
Position
3806773..3808371
Genome browser
AA seq
532 aa
AA seq
DB search
MRKTVAFGFVGTVLDYAGRGSQRWSKWRPTLCLCQQESLVIDRLELLHDTRSRSLFETLK
RDIASVSPETEVVGVEIELHNPWDFEEVYACLHDFARGYEFQPEKEDYLIHITTGTHVAQ
ICWFLLAEARYLPARLIQSSPPRKKEQPRGAGEVTIIDLDLSRYNAIASRFAEERQQTLD
FLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRIFELKQARHQFSG
AFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQA
MLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYARINLWTFTLPG
LRQRQEDIEPNLDYEVERHATLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVT
RMATFATSGRITLDVVEDEINRLRYNWQESRPSALTALLGAEAENIDLFDRMQLEHVIAI
CRQAKSLSAAGRQLFDVSRQGKASVNDADRLRKYLARFGLTWEAVQDQHSSS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaacagtggcttttggctttgtcggtaccgtgctggattatgccggacgcggc
agtcagcgctggtcgaaatggcgtccgacgctttgtttatgccagcaagaatcgttagtc
atcgatcggctggaattgttgcacgacacccgctcgcgctcgctattcgaaacgcttaaa
cgcgatatcgccagcgtttcgccagaaacagaagtcgtgggcgttgagattgaactgcat
aacccgtgggatttcgaagaggtttacgcctgcctgcatgatttcgcccgtggttacgag
tttcagccagaaaaagaagactatttaattcacatcaccaccggcacccacgtcgcgcag
atttgctggtttctgctggcggaagcgcgttacctgcccgcccggctgatacaatcttca
cctccgcgcaaaaaagaacagccgcgcggcgcaggtgaagtgacgattatcgatctcgat
ttaagccgttataacgccatcgccagccgctttgccgaggaacgccagcaaacgcttgat
tttcttaagtccggcattgccacgcgtaacccccacttcaaccgcatgattgagcagatc
gaaaaagtggcgatcaaatcccgcgcgccgattctgcttaacggtccaaccggcgcgggc
aagtcatttctggcgcgacgcatcttcgagttaaaacaggcgcggcatcagtttagcggc
gcgtttgtggaagtgaactgcgccaccctgcgcggcgataccgccatgtcgacgctgttt
ggtcatgtaaaaggcgcgtttaccggggcgcgggaatctcgtgaaggtttattacgcagc
gccaacggcggaatgttgtttcttgatgagattggcgaactgggcgcagacgaacaagca
atgctgctaaaagccattgaagagaaaaccttttacccgtttggcagcgatcgccaggtg
agcagtgattttcagcttatcgccggaacggtgcgcgatttgcgccagctggttgccgaa
ggcaaatttcgcgaagatctgtacgcgcggatcaatctctggaccttcaccctgccgggt
ctacgccagcgccaggaagatattgaaccgaaccttgattatgaagtggagcgccacgcc
acactcactggcgacagcgtgcgttttaacaccgaagcgcggcgcgcctggttggctttt
gcgacctctccccaggcaacatggcgcggtaactttcgcgaactttctgccagcgtcacg
cggatggccacctttgccactagcggacgcatcactctggacgtggttgaagatgagata
aaccgtctgcgctataactggcaggagagccgcccctccgcgcttacggcgttgctgggc
gcagaggcagaaaacatcgatctcttcgaccgtatgcaactggaacacgttatcgctatc
tgccgccaggcaaagtcgctttctgcagccggacgacagctttttgatgtttcgcgccag
ggcaaagccagcgtcaatgacgcggatcggctacgcaaatacctggcgcgttttggtctg
acgtgggaagccgtgcaggatcagcacagctccagttga
DBGET
integrated database retrieval system
