Escherichia coli O152 H28 SE11 (commensal): ECSE_3986
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Entry
ECSE_3986 CDS
T00784
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
ecy
Escherichia coli O152:H28 SE11 (commensal)
Pathway
ecy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ECSE_3986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecy03400
]
ECSE_3986
DNA repair and recombination proteins [BR:
ecy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ECSE_3986
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_27
AAA_29
ABC_tran
Aq_aa27
AAA_16
AAA_13
Motif
Other DBs
NCBI-ProteinID:
BAG79510
UniProt:
B6I3T3
LinkDB
All DBs
Position
complement(4129164..4130237)
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AA seq
357 aa
AA seq
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MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV
IRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPE
GFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYEQLRPWDKE
LIPLAEQISTWRAQYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNFER
DRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYL
IDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTVEKGKITD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcacccgcttgttgatccgcgatttccgcaacattgaaaccgcggatctcgct
ttatctcccggctttaactttctggtaggtgccaacggcagtggcaaaaccagcgtgctg
gaagccatctatacgctcggccatggtcgggcgtttcgcagtttgcagattggtcgcgtc
attcgccatgagcaggaggcatttgttctccatgggcgattacagggcgaagagcgcgag
acggcgattggcttaaccaaggacaaacagggcgacagcaaagtccgcatcgacggtact
gacgggcataaagtcgcggaactggcgcacctgatgccaatgcagctgataacgccagaa
gggtttactttactcaacggcggccccaaatacagaagagcattcctcgactggggatgc
tttcacaacgaacccggatttttcaccgcctggagcaatctcaagcgattgctcaagcag
cgcaatgcggcgctgcgccaggtgacacgttacgaacagctacgcccgtgggataaagaa
ctgatcccgctggcggagcaaatcagcacctggcgcgcccagtacagcgccggtatcgcg
gccgatatggctgatacctgtaagcaatttctccctgagttttctctgactttctctttc
cagcgcggctgggagaaagagacagaatatgctgaggtactggaacgtaattttgaacgc
gatcgccagctaacctacaccgcgcatggcccgcacaaagcggacttacgcattcgcgcc
gacggtgcgccggtggaagataccttatcgcgtgggcagcttaagctgttgatgtgcgcc
ttacgtctggcgcaaggagagttcctcacccgtgaaagcgggcggcggtgtctctacctg
atagatgattttgcctctgagcttgatgatgagcgtcgcgggttgcttgccagccgctta
aaagcgacgcaatcacaggtctttgtcagcgcgatcagtgctgaacacgttatagacatg
tcggacgaaaattcgaagatgtttaccgtggaaaagggtaaaataacggattaa
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