Escherichia coli O45 K1 H7 S88 (ExPEC): ECS88_0796
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Entry
ECS88_0796 CDS
T00830
Symbol
uvrB
Name
(GenBank) excinulease of nucleotide excision repair, DNA damage recognition component
KO
K03702
excinuclease ABC subunit B
Organism
ecz
Escherichia coli O45:K1:H7 S88 (ExPEC)
Pathway
ecz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECS88_0796 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecz03400
]
ECS88_0796 (uvrB)
DNA repair and recombination proteins [BR:
ecz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECS88_0796 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECS88_0796 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SBDS_domain_II
IF2_N
UB2H
DUF1844
PRDA1_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAR02135
UniProt:
B7MGN7
LinkDB
All DBs
Position
816655..818676
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPR
FTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttaaaccttctggcgatcagccggaggcg
attcgacgtctcgaagaggggctggaagatggcctggcgcaccagacgttacttggcgtg
actggctccgggaaaaccttcaccattgccaatgtcattgctgaccttcagcgccctacc
atggtacttgcgcccaacaaaacgctggcggcccagctgtatggcgaaatgaaagaattc
ttcccggaaaacgcggtggaatatttcgtctcctactacgactactatcagccggaggcc
tatgtaccgagttccgacacctttattgagaaagatgcctcggtaaacgaacatatcgaa
cagatgcgtttgtccgccaccaaagcgatgctggagcggcgtgatgtggttgtggtggcg
tctgtttccgcgatttatggtctgggcgatcctgatttatatctcaagatgatgctccat
ctcacggtcggtatgattatcgatcagcgcgcgattctgcgccgactggcggagctgcaa
tacgctcgtaatgatcaggcattccagcgcggtactttccgcgttcgtggtgaggtgata
gatatcttcccggcagaatcggatgacattgcacttcgcgtggaactgtttgacgaggaa
gtggaacgattgtcgttatttgacccgctgaccgggcagattgtttccactattccacgt
tttaccatctacccgaaaacgcactacgtcacgccgcgcgagcgcatcgtacaggcgatg
gaagagatcaaagaagaactggccgccagacgcaaagtgctgttggagaacaacaagttg
cttgaagagcagcggctgacccagcgtacccagtttgatctggagatgatgaacgagctg
ggctactgttccgggattgagaactactcgcgcttcctctccggtcgtggaccgggtgag
ccaccgccgacgctgtttgattacctgcctgccgatgggctgttggtcgtcgatgaatct
cacgtcaccattccacaaattggcggcatgtatcgcggtgaccgggcgcgtaaagagact
ctggtggagtacggcttccgcctgccatcagcgctggataaccgtccgctgaaatttgaa
gagttcgaagcattagcgccgcaaaccatctatgtttcggcgacgccgggtaattacgag
ctggaaaaatccggtggcgatgtggtggatcaggtggtgcgtccaacaggcttactcgac
ccgattatcgaagtgcggccagtggcaacacaggtggatgatcttctttcggagattcgt
cagcgagcggcaattaacgaacgcgtactggttacaactctgaccaagcggatggcggaa
gatctcactgaatatctcgaagaacacggtgagcgcgtgcgttatcttcactcagatatc
gacaccgtcgaacgtatggagattatccgcgacttgcgtctgggtgagttcgacgtattg
gtagggatcaacttactgcgcgaaggtctggatatgccggaagtttcgctggtggcgatc
ctcgacgctgacaaagaaggcttcctgcgttccgaacgttcgttgatccagaccattggt
cgtgcggcacgtaacgttaacggtaaagcgattctctatggcgataagatcaccccatca
atggcgaaagcgattggcgaaaccgaacgtcgccgcgagaaacagcagaagtacaacgaa
gaacacggcattacgccgcaaggcttgaacaagaaagtggtcgatatcctggcgctgggg
cagaacattgccaaaaccaaagcgaagggcagaggaaaatcgcgcccgattgttgaaccg
gataatgtgccgatggatatgtcgcctaaagcgttacagcagaagatccatgaactggaa
gggttgatgatgcaacacgcgcagaatctggagttcgaagaagcggcgcaaattcgtgac
cagttgcatcagttgcgtgagctgtttattgccgcgtcgtga
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