Escherichia coli O45 K1 H7 S88 (ExPEC): ECS88_1052
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Entry
ECS88_1052 CDS
T00830
Symbol
csgD
Name
(GenBank) DNA-binding transcriptional activator in two-component regulatory system
KO
K04333
LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
Organism
ecz
Escherichia coli O45:K1:H7 S88 (ExPEC)
Pathway
ecz02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECS88_1052 (csgD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecz03000
]
ECS88_1052 (csgD)
Transcription factors [BR:
ecz03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
ECS88_1052 (csgD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
VpsT-like_REC
Sigma70_r4_2
HTH_24
HTH_40
HTH_23
Mcm-like_N
RNA_binding
DUF1799
Motif
Other DBs
NCBI-ProteinID:
CAR02380
UniProt:
B7MII0
LinkDB
All DBs
Position
complement(1088490..1089140)
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AA seq
216 aa
AA seq
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MFNEVHSIHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM
MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYAMEDQERVVNG
LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL
FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaagtccatagtattcatggtcatacattattgttgatcactaaaccttct
ttgcaggcgacagctctcttgcagcaccttaaacaatcgctggcaattacaggaaaatta
cataatattcaacgttctctggacgatatatcttcaggctctattattcttctggatatg
atggaagcggataaaaagcttatccattattggcaggatactttgagcaggaaaaacaac
aatatcaaaatattgttgctaaatacgcctgaagattacccgtaccgcgacattgaaaac
tggcctcatatcaacggcgttttttatgccatggaggatcaagaacgtgttgtcaatggg
ttgcaaggcgtcctgcgcggcgaatgctactttacgcaaaagcttgccagttacctgatt
acgcattcaggtaactatcgttataacagcacggaatcagccctccttactcatcgggaa
aaagagatcctgaataagctgcgtatcggcgcgtctaataacgagatcgctcgttcgttg
ttcatcagcgaaaatacggttaaaacgcatctttataatcttttcaagaagatagccgta
aaaaaccggacacaagcggtttcctgggcaaacgataacctcaggcgataa
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