Escherichia coli O45 K1 H7 S88 (ExPEC): ECS88_1533
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Entry
ECS88_1533 CDS
T00830
Symbol
ydcS
Name
(GenBank) putative spermidine/putrescine transporter subunit; periplasmic-binding component of ABC superfamily transporter
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ecz
Escherichia coli O45:K1:H7 S88 (ExPEC)
Pathway
ecz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECS88_1533 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecz02000
]
ECS88_1533 (ydcS)
Transporters [BR:
ecz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ECS88_1533 (ydcS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Phosphonate-bd
Glyco_hydro_62
Motif
Other DBs
NCBI-ProteinID:
CAR02850
UniProt:
B7MMS3
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Position
1524744..1525889
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AA seq
381 aa
AA seq
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MSKTFARSSLCALSMTIMTAHAAEPPTNLENPEGRLDIIAWPGYIERGQTDKQYDWVTQF
EKETGCAVNVKTAATSDEMVSLMVKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKA
LDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYITKTFPTPPDSWQVVFVEQNLPDGKSNKG
RVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRDQHSLIHRYWHDTT
VQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFPKEGVTGWADTTMLHSEAKHPVCAY
KWMNWSLTPKVQGDVAAWFGSLPVVPQGCKASPLLGEKGCETNGFNYFDKIAFWKTPIAE
GGKFVPYSRWTQDYIAIMGGR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagacatttgcccgcagcagcctgtgtgcgctcagcatgacaataatgaccgct
cacgccgccgaaccgcctaccaatttagagaatccggaagggcgactggatattatcgcc
tggccgggatacatcgaacgcggacaaactgataaacagtacgactgggtaacgcaattc
gaaaaagagacaggctgcgcggtgaatgttaaaaccgccgcgacttccgatgaaatggtc
agtctgatggtcaaagggggttacgatctggttacggcatccggcgatgcctcgctgcgt
ttgattatgggcaaacgcgtgcagccaattaataccgccttgattcccaactggaaagcg
ctcgatccgcgcgtggttaaaggcgactggtttaacgttggcggcaaagtttacggcaca
ccttaccaatgggggccgaacctgctgatgtacatcactaaaaccttcccgacgccgccg
gatagctggcaagtggtttttgttgagcagaatctgccggacggcaagagcaataaaggc
cgggtacaggcttatgatggccctatctacattgcggatgccgcgttgttcgtcaaagcc
acgcagccacagttgggcatcagcgatccgtatcaactcaccgaagaacagtatcaggcg
gtgctgaaagtgctgcgcgatcaacatagtttgatccatcgctactggcatgacactacc
gtgcaaatgagcgatttcaaaaacgagggtgtggttgcttccagtgcatggccctatcag
gccaacgccctgaaagccgaaggccagcctgtcgctaccgttttcccgaaggagggcgtt
accggttgggctgacaccaccatgctacatagcgaagcgaaacatccggtttgcgcctac
aaatggatgaactggtcattaaccccaaaagtgcagggcgatgtggcggcctggtttggc
tcgttaccagtagtgccgcaagggtgtaaagccagtccgttattaggcgagaaaggttgt
gaaacaaacggttttaactatttcgataaaatcgccttctggaaaacgcctatagcagaa
gggggcaagtttgttccctacagtcgctggacgcaggattacattgccattatgggcggt
cgctaa
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