Escherichia coli O45 K1 H7 S88 (ExPEC): ECS88_2232
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Entry
ECS88_2232 CDS
T00830
Symbol
gatR
Name
(GenBank) Galactitol utilization operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
ecz
Escherichia coli O45:K1:H7 S88 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ecz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecz03000
]
ECS88_2232 (gatR)
Transcription factors [BR:
ecz03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
ECS88_2232 (gatR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
CoA_trans
HTH_PafC
CggR_N
HTH_5
FeoC
DUF977
SelB_WH_2nd_bact
MarR
DsrD
Motif
Other DBs
NCBI-ProteinID:
CAR03518
UniProt:
B7MEE5
LinkDB
All DBs
Position
complement(2207616..2208395)
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AA seq
259 aa
AA seq
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MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMT
AKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGA
DGIDAVNGITTFNEGYSVSGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDA
VSEVDKLALQKTRVKLITV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaattcattcgagcgaaggaataagatcatccaattagtgaatgaacaggga
accgtgcttgttcaggatctggcgggagtatttgctgcctcggaagcgacaatccgtgcc
gatttgcgctttctcgaacaaaaaggcgtggttacgcgctttcatggcggtgcggcgaaa
ataatgtccggtaatagtgaaaccgagacccaggaagttgggtttaaagagcgatttcag
ctcgccagtgcgccaaaaaacagaatagcgcaggcggcagtcaaaatgatccacgaaggg
atgaccgttattctcgacagcggaagtaccacaatgcttatcgccgaaggtttaatgacc
gccaaaaatatcacggtgattaccaacagtctcccggcggcgtttgccctttccgaaaat
aaagacattactctggtcgtctgcggtggcacggtccgccataaaacgcgatctatgcat
ggatctattgctgaacgttccctgcaggatattaatgccgatttaatgtttgtcggtgct
gatggtattgatgcggttaatggtattacgacctttaatgaaggttattccgttagcggt
gcgatggtgacagcggcgaataaagtgattgccgttctcgattcatcgaaatttaaccgt
cgcggttttaatcaggtactgccaatcgaaaaaattgacattattattaccgatgatgct
gtgtctgaggtggataaactggcattgcagaagacacgggtaaaattaattacggtgtag
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