Escherichia coli O45 K1 H7 S88 (ExPEC): ECS88_3408
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Entry
ECS88_3408 CDS
T00830
Symbol
ygiS
Name
(GenBank) transporter subunit: periplasmic-binding component of ABC superfamily
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ecz
Escherichia coli O45:K1:H7 S88 (ExPEC)
Pathway
ecz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECS88_3408 (ygiS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecz02000
]
ECS88_3408 (ygiS)
Transporters [BR:
ecz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ECS88_3408 (ygiS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
EAD9
Motif
Other DBs
NCBI-ProteinID:
CAR04638
UniProt:
B7MA89
LinkDB
All DBs
Position
complement(3372088..3373695)
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AA seq
535 aa
AA seq
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MYTRNLLWLVSLVSAAPLYAADVPANTPLAPQQVFRYNNHSDPGTLDPQKVEENTAAQIV
LDLFEGLVWMDGEGQVQPAQAERWEILDDGKRYIFHLRSGLQWSDGQPLTAEDFVLGWQR
AVDPKTASPFAGYLAQAHINNAAAIVAGKADVTSLGVKATDDRTLEVTLEQPVPWFTTML
AWPTLFPVPHHVIAKHGDSWSKPENMVYNGAFVLDKWVVNEKITARKNPKYRDAQHTVLQ
QVEYLALDNSVTGYNRYRAGEVDLTWVPAQQIPAIEKSQPGELRIIPRLNSEYYNFNLEK
PPFNDVRVRRALYLTVDRQLIAQKVLGLRTPATTLTPPEVKGFSATTFDELQKPMSERVA
MAKVLLKQAGYDASHPLRFELFYNKYDLHEKTAIALSSEWKKWLGAQVTLRTMEWKTYLD
ARRAGDFMLSRQSWDATYNDASSFLNTLKSDSEENVGHWKNAQYDALLNQATQITDATKR
NALYQQAEVIINQQAPLIPIYYQPLIKLLKPYVGGFPLHNPQDYVYSKELYIKAH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgcgaaatttattatggctggtcagcctggtaagtgcggctcctctctacgct
gctgacgttcccgccaacacaccgctcgccccgcaacaagtctttcgttacaacaatcat
agcgacccaggcacgctcgacccgcaaaaggtagaggagaatactgccgcgcagattgtg
ctggatctgtttgaaggtctggtatggatggacggtgaaggccaggtgcagcccgctcag
gctgaacgctgggagatacttgacgacggcaagcgctatattttccatctgcgtagcggt
ttgcagtggtcagacggtcagcctctgacggcagaggattttgtcctcggctggcagcgc
gcggttgacccgaaaacggcaagcccttttgctggctatctggcacaggcgcacattaac
aatgccgcggctattgttgcgggtaaagcagatgttacatcgctgggtgtcaaagcgacg
gatgatcgtactcttgaagttacgcttgagcagccagttccttggttcacgacgatgctc
gcctggccgacgctgttcccggttcctcatcatgtcatcgctaaacatggcgatagctgg
agtaagccagagaacatggtttacaacggtgcctttgtgcttgataaatgggtagttaac
gaaaagattactgcacgcaaaaatccaaagtaccgcgatgcgcaacatacagtattgcaa
caggttgagtatctggcgctggataattcggtcaccggctataaccgctatcgcgcggga
gaggtcgatctcacctgggttccggcgcagcaaattcccgccattgaaaaatcacagcct
ggcgagctacgaattatcccgcgtctgaacagcgaatattacaactttaaccttgagaaa
ccgccatttaacgatgtgcgggtgcgtcgggcgctatatcttacggttgatcgacagctt
attgcgcaaaaggtactggggttgagaacgcccgcaaccacgctgacgccgccagaggta
aaaggctttagcgcgacgacgttcgatgaactgcaaaagccaatgagtgagcgcgtcgcg
atggcaaaagtcttgctgaaacaggcgggatacgacgcctctcatccgctacgctttgag
ctgttctacaacaagtacgatctgcatgaaaagaccgcgatagcgttgtcttccgaatgg
aaaaaatggctgggtgcacaggtgacgctgcgcacaatggagtggaaaacctatcttgat
gcccgacgagccggtgattttatgctgtctcggcagtcgtgggatgcgacgtacaatgat
gcctccagcttcctgaacacgctcaaaagcgatagtgaagaaaacgtcggtcactggaaa
aatgcgcagtatgacgccttactaaaccaggccacgcagatcactgatgcgacaaagcgt
aatgcgttgtatcagcaggcagaagtgatcatcaaccagcaggcaccgctgattcccatc
tactatcagccgttaatcaaactgcttaaaccctacgttggcggttttccgctgcataat
ccccaggattatgtctacagcaaagagttgtatatcaaggcacattga
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