Escherichia coli O45 K1 H7 S88 (ExPEC): ECS88_4239
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Entry
ECS88_4239 CDS
T00830
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ecz
Escherichia coli O45:K1:H7 S88 (ExPEC)
Pathway
ecz03420
Nucleotide excision repair
ecz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECS88_4239 (uvrD)
03430 Mismatch repair
ECS88_4239 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecz03400
]
ECS88_4239 (uvrD)
Enzymes [BR:
ecz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECS88_4239 (uvrD)
DNA repair and recombination proteins [BR:
ecz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECS88_4239 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ECS88_4239 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAR05431
UniProt:
B7MH77
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All DBs
Position
4208043..4210205
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMTV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgcgaagcggtggccgcg
ccacgcagcaaccttctggtgctggcgggcgcgggcagtggtaagacgcgcgtactggtg
catcgtatcgcctggctgatgagcgtggaaaactgctcgccatactcgattatgacggta
acgtttaccaacaaagcggcggcggagatgcgtcatcgtatcgggcagctgatgggcacc
agccagggcggcatgtgggtcggcaccttccacgggctggcgcaccgtctgctgcgtgcg
caccatatggacgccaatctgccgcaggattttcagatcctcgacagcgaggaccagcta
cgcctgctcaaacgcctaatcaaggcgatgaacctcgacgagaagcagtggccgccgcgc
caggcaatgtggtacatcaacagccagaaagatgaggggctgcgtccgcatcatattcag
agctacggtaatccggtggagcagacctggcagaaggtgtatcaggcgtatcaggaagcg
tgtgaccgcgcgggcctggtggacttcgccgagctgctgctacgtgctcacgagttgtgg
cttaacaagccgcatatccttcagcactatcgcgaacggtttaccaatatcctggtggac
gaattccaggataccaacaacattcagtatgcgtggatccgactgctggcaggcgatact
ggcaaagtgatgatcgttggcgatgacgaccagtcaatctacggctggcgcggagcgcag
gtggagaatattcagcgtttcctcaatgatttccccggtgctgaaactatccgtctggag
cagaactaccgctctaccagcaatattctgagcgccgctaacgccctgattgaaaacaat
aacgggcgtctgggtaaaaaactgtggaccgatggcgcggacggtgagcctatttccctc
tattgcgcttttaacgaactcgacgaagcgcgttttgtggttaaccgcatcaaaacctgg
caggacaacggcggggcgcttgccgagtgcgccattctctaccgcagcaacgcccagtcg
cgtgtgctggaagaggcgttattgcaggcgagtatgccgtatcgtatttacggcgggatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcgtatctgcgcctgattgccaac
cgcaacgacgacgcggcctttgagcgtgtggttaatacgccaacgcggggtattggtgac
cggacgctggacgtggtacgtcagacatcgcgcgatcgccagttaacactctggcaggca
tgtcgtgaactgttgcaggaaaaagccctcgccggacgtgctgccagcgccttacagcgg
tttatggagctgatcgacgccttagcgcaggaaactgccgatatgccgctgcatgtacag
actgaccgggtaattaaagactccggcctgcgcaccatgtacgagcaggagaagggcgaa
aaaggtcagacgcgtatcgaaaacttagaggaactggtgacggcaacgcgccagttcagc
tacaacgaagaagacgaagatttaatgccgctgcaggcattcctctcccatgcggcgctg
gaagcgggcgaggggcaggcggatacctggcaggacgcggtgcagttgatgacgctacac
tcggcgaaaggtctggaattcccgcaggtgtttatcgttggtatggaagagggcatgttc
ccaagccagatgtcgctggatgaaggcgggcgtctggaagaagaacgccgtctggcctac
gttggcgtaacccgcgcgatgcagaaactgacgctgacctacgcggaaacccgccgtcta
tatggcaaagaggtttaccatcgcccgtcgcgctttatcggtgagttgccggaagagtgt
gtggaagaggtgcgcctgcgcgccacggtaagccgcccggtcagccatcaacggatgggg
acgccgatggtcgagaacgacagcggctacaagctcggccagcgcgtacgccacgctaag
tttggtgaaggcaccatcgtcaatatggaaggcagcggtgagcatagccgtttgcaggtg
gcgttccagggccagggtattaaatggctggtggcggcttacgcccggttggagacggtg
tga
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