Escherichia coli O45 K1 H7 S88 (ExPEC): ECS88_p0103
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Entry
ECS88_p0103 CDS
T00830
Symbol
yacC
Name
(GenBank) putative exoribonuclease YacC
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ecz
Escherichia coli O45:K1:H7 S88 (ExPEC)
Pathway
ecz03030
DNA replication
ecz03430
Mismatch repair
ecz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECS88_p0103 (yacC)
03430 Mismatch repair
ECS88_p0103 (yacC)
03440 Homologous recombination
ECS88_p0103 (yacC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecz03032
]
ECS88_p0103 (yacC)
03400 DNA repair and recombination proteins [BR:
ecz03400
]
ECS88_p0103 (yacC)
Enzymes [BR:
ecz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ECS88_p0103 (yacC)
DNA replication proteins [BR:
ecz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ECS88_p0103 (yacC)
DNA repair and recombination proteins [BR:
ecz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ECS88_p0103 (yacC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CAQ87168
UniProt:
B7LIA0
LinkDB
All DBs
Position
pECOS88:85083..85931
Genome browser
AA seq
282 aa
AA seq
DB search
MNNDELATRRAQAIAEDRCFSKERLRDEFRMKPAPGAEPVKWYKNTYGGRFAVYRIADCV
PMREKRPLTSKQLLAGQRLSVLSRLNSTSGRMARQAYDWLSLAPLFLDTETTGLDNTAEA
LEIGLTDASGQVVFETRLKPTVAIGAQAAAVHGISEQALCGAPSWTDVARQLRHAIGDRP
VIIFNARFDIRILKQTAAAHSDPADWLEELTVYCAMELAAGYYGATNRYGTISLACAASQ
AGLTWEGQAHSAIADARMTAGVVNAIAAYHLELLQEQARLKI
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgatgagctggccaccagacgtgcgcaggcgattgccgaagacaggtgtttc
tcgaaagaacggctgcgcgatgaattcagaatgaagccagcccccggtgctgagccggtt
aagtggtataaaaacacttatggtggcaggttcgctgtataccgaattgcagactgtgtt
ccgatgcgtgagaaacgcccactgacgagtaaacaacttctggctggccagcgactttcc
gttttatccagacttaacagcaccagtggccggatggcacggcaggcatatgactggctg
agtctggcaccgctctttctggatactgaaacgacaggactggacaataccgcggaagct
ctggaaatcggcctgaccgatgcgtccggtcaggtggtatttgaaaccaggctgaagccc
acggtcgccatcggggcgcaggccgccgctgtgcatggtatcagcgagcaggctctctgc
ggcgcaccatcatggacagatgtggcgcggcaactgcgtcatgcaatcggggaccgacca
gtaattatctttaatgcccggttcgacatccgcattctgaaacagactgctgccgcacat
agcgatccggctgactggctggaagaactgacggtatattgtgcgatggagctggctgca
ggatattatggggccaccaaccgctatggcacgatttcactggcctgtgctgccagccag
gccggactgacctgggaagggcaggcacactcagcgatcgccgacgcacggatgacggca
ggggtggtaaacgctattgctgcatatcatctggaactgctgcaggaacaggcacggctg
aaaatctga
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