Edaphobacter sp. 12200R-103: GWR55_01170
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Entry
GWR55_01170 CDS
T06408
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda02010
ABC transporters
eda02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GWR55_01170
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GWR55_01170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eda02000
]
GWR55_01170
Transporters [BR:
eda02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
GWR55_01170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
HTH_IclR
Peripla_BP_1
HTH_27
Peripla_BP_6
TrmB
Dimerisation
HVO_A0261_N
HTH_11
HTH_20
WHD_TBPIP
Peripla_BP_3
MarR_2
HTH_36
Bmp
FUR
MarR
HTH_24
Rrf2
HTH_7
DUF4423
HTH_23
HTH_46
DnaD_N
Penicillinase_R
SMC_Nse1
Cullin_AB
PAH
Motif
Other DBs
NCBI-ProteinID:
QHS50510
LinkDB
All DBs
Position
251767..252858
Genome browser
AA seq
363 aa
AA seq
DB search
MAKTSKRLYLIPVLSKSLDILELLQAENRPMSLETIHRRTRISKTTVYRVLKTLVHRGYL
AQSPDGMYRHVMRPKKLRFGFAGQSADMPFSEEVTRSLRDAAAAAGVDLIELDNRYDAAT
AVQNAEEFIHDKVDLIIEFNVEQSVAAIIGDKVASASIPLIAIDIPHPNATYFGVDNYRV
GVEAGEMLARHAQTEWNGKVDRVIGLDLPEAGLLVQGRISGAFEAVRSAFPTLPSDAFLR
LDGRGMRETSTKLIVEYLENHPRERHILVAAATDTSALGVVDAARQLKRQRHLVVVGQDC
IAEALEEIQSSTSPLIASVSHETNAYGPNLMQLGLALLKGQIVPPYNYVSHKLVTRTLSQ
QET
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaaacatcaaagcgcctctaccttatcccggtcctctcgaagtcactggacatc
cttgagctgttgcaggccgaaaaccggcccatgtcgttggagacgatccatcggcgaacc
cgtatctctaagacgacggtgtaccgggtcctgaagaccttggtgcaccgtggctatctg
gcgcagtcaccggatggaatgtaccggcatgtgatgcgtcccaagaaactgcgcttcggc
ttcgccgggcagagtgcggacatgcctttttcggaagaggtaacgcggagcctgcgcgat
gctgcggccgctgcgggagtcgacctgatcgagctggacaaccgctatgatgccgctacc
gccgtgcagaacgcggaggagtttatccacgataaggtagacctgattattgagtttaat
gtcgagcagtcggttgcggcgatcatcggagataaagtcgcttcggccagcatcccgttg
atcgccatcgatattccgcacccgaacgcgacctactttggcgtggacaactatcgggtg
ggagttgaagcgggtgagatgctggcgcgtcatgcgcagacggagtggaacggcaaggtc
gaccgggtgatcggtttggaccttcccgaggcgggtctactggtgcagggaagaatctcg
ggggcatttgaagccgttcgttcggcctttcccacgcttccctccgatgcgtttcttcgc
ctggatggtcgcggtatgcgcgagaccagcacgaagctgattgttgaatacctggagaac
catcccagggagcgtcacattctggtggctgccgctacagatacgagtgccctgggagtc
gtcgatgcggcgcgtcaactaaagcggcaacggcatctggtggtggtagggcaggactgt
attgccgaggctctcgaggagattcagtccagtacgtcacccctgatcgcatcggtctcg
cacgagacaaatgcctatggtccgaacctgatgcagcttgggctggcgctgctgaagggg
cagatcgttcctccttataactacgtgtcgcacaagctggtgacccgtacgttgtcacag
caggagacttag
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integrated database retrieval system
