Edaphobacter sp. 12200R-103: GWR55_01695
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Entry
GWR55_01695 CDS
T06408
Name
(GenBank) choice-of-anchor D domain-containing protein
KO
K21449
trimeric autotransporter adhesin
Organism
eda
Edaphobacter sp. 12200R-103
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eda02000
]
GWR55_01695
Transporters [BR:
eda02000
]
Other transporters
Pores ion channels [TC:
1
]
GWR55_01695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cep192_D4
ASH
HYDIN_VesB_CFA65-like_Ig
SBBP
Ig_CFAP65_4th
TMEM131_like_N
Cep192_D8
DUF1573
Ig_CFAP74_1st
PapD-like
DUF4131
DUF5980
DUF6252
Motif
Other DBs
NCBI-ProteinID:
QHS50604
UniProt:
A0A6B9YMG3
LinkDB
All DBs
Position
380789..385252
Genome browser
AA seq
1487 aa
AA seq
DB search
MTMTRLFCSLVLAAPVFSAQALMGAPIARQSADTQLLPLTFEENRGQAPDGVRFLSHSSD
GEFLFTSRKVVLPCSAKGSPISLLLGNDASSLRAEEPTNGVANYYAGNDRTHWLQGIPLD
RQIRYEQAAPGIDLVFHGRDGHLEYDLQVAPGADVEAMRLSLSGGASFHLEADGSATVQL
ANTNSTCQGLHFLAPIATQQIDGKTATVESHFTLDADGRLGFTASHYDRSRSLLIDPVVS
YTKIIGASNGVEVSALQVDASGSVFLTGQTYASDYPVAGGGQGSTGQGGSEQIYVTKLDP
TGTQILYSTYIPSPGFNTAEGIALDASGNAYVTGITGSSSFPTTSANLGTCTNSFCNTGF
VAKFDGTGAMVYSTLIGTGQQLPRGITVDTDGNAYIAGNSSDNGLKTVNAFQPSYTGMVC
TTCGGVFFAKLNPTGTDWVFSSYFFSPGQIGASAMATSITRDTQGNIYFGGNGTSVPLKG
SFQDGTGGSFVAEFAPDGKTLLFSTLLGGDTFVADTLGQIQVGADGTIYLAGSQIAPDFP
YTVEAYRHPIYSIGYAQSKQYLFASAINPSHTGYTWSTYLGEGFVNTTAMDTKGNFYIAG
SFGLNSLPFKDAVAADSPGAGAFILGLTPKGDLVSSTGFGGRVISQVPNGMAIDPSGNIY
IAGTANSLSINNGFPYGFYDPINVGTGTAYTDQARSGSYSSFIAKIAPTNQPQISLTYSG
PMLELRNAGSADLHIVSIVPGNSITSIINACGTTVAAASSCFLTPLSTTRGGTLTINSDA
QPSSQTFTPTGLASSLGAVVYVDSSQLNIPPTQNGTTSVAKPLYIWNLGNAGVAISSILT
FGWTSQTNDCPAILAPGTFCTASVTVKPVSAGAPSGSYDIGVVYGSGSRVDVYPNFTPNP
VDGPLLFSADRSLQYGNVQLGTTSLIRTVTITNSGTAPVTVDVPSFSGDGASSFTVAANT
CAGIALASQASCVIGVSFEPLQAGRLAVPMLLSGGGSSTTIYVIGTGISTPSLSINPGSF
DFGNVVPGTTATQTVQIKNTNATEIALTSITAGAADGGLQPDYSQTNDCGATLASNASCS
ITVTFGPSVLGMRKGAVTLMIDGGALTSKVLLTGTGVPAFLAAPNSLSFSSTPVGSKVSQ
SISLVNQSSMSLAPVLTTTAPFSIDSTTCNGPLAAGTSCLIFVGFQPDSNGPQAAVLTVA
SGEVNPITVPLSGTGTVSAITLSPTSLTFEGANIGTSAAAQTIALTNSGAAPLTALTFGI
SGVNPEDFKLTTTCGISLASQQSCLLNVVFTPSSAGAESATLFISSNAATGPATVALVGT
GNSSGLALSTSSPSATISGGSSAPYTLVQQPRPGATGTITFTCADLPLYAACSFSPASLS
IANGGSTTLTVTTSQTQTAARRQPINIEAAGCLASLFLLPVVRRRSWLTLLSCLLLFAFV
GIGGCASSSKPSSLSSTNLTPKGTYTFHVIASAGTQMQTIPLTLTVQ
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgactatgactcgtctgttctgctcgcttgtgctggctgccccagtgttttccgctcag
gcgttgatgggagcccccattgctcggcagagcgctgatacccagttgctcccactcacg
tttgaggagaaccgtgggcaagcgcccgacggtgtccgtttcctctcccacagctccgac
ggggagttcctgtttacctcacgcaaggtggtgcttccgtgttcggccaagggttctccc
atctctttgcttctggggaacgatgcgtcttctttgcgcgccgaagaaccaacgaatggc
gtcgccaactactacgcaggtaacgaccgcacgcactggttgcaaggcattccgcttgac
cggcagattcgttatgagcaggctgcccctggcatagatctcgtttttcatggaagagac
ggtcatctggaatacgatcttcaggtagctcctggtgcagatgtagaggcgatgcgtctc
agtttgagcggtggagcgtcgtttcatctcgaagctgacggctcagcgaccgtgcaactg
gcaaacacaaactcgacctgccagggattgcattttctcgcacccatcgcaacgcagcag
atcgatggaaagactgccacggtggagagtcacttcacgctcgatgctgatggtcgcctc
ggtttcactgcgtctcattacgatcgcagccgttctctcctcatcgaccctgtcgtgagt
tacacaaagatcatcggcgccagtaacggtgtggaagtctccgcgttacaggtggatgcc
agtggatccgtctttctaaccggtcagacctacgcctcagactatccggttgctggtgga
ggacaaggaagtaccgggcagggtggtagtgagcagatctacgttacaaaactcgatccc
actgggacacagatcctgtactccacatatataccctcacctggcttcaacactgctgag
gggattgctctggatgcttcgggtaatgcctacgtcactggcattacgggcagctccagt
tttcctacgacttcggcgaatctgggtacatgcacaaatagtttttgcaacaccggcttc
gtcgccaaattcgacggtaccggagcgatggtctattccactctgatcggtacagggcag
cagcttccacgcggtattactgtcgataccgacggcaatgcttatatcgcaggcaacagc
agcgacaatggcttgaagacagtcaatgcgtttcaaccgtcgtataccggcatggtttgt
acaacatgcggcggagttttttttgccaagctgaaccctactggaacggactgggttttt
tcgagctacttttttagtcctggccagattggggcatccgcgatggcaacttccatcacc
cgcgacacccagggcaacatctacttcggaggcaacggcacctccgttcctctcaaaggc
tctttccaggatggcaccggaggctccttcgtcgcggagtttgcaccagatggcaagacg
ctgctgttcagtacgcttctgggtggtgataccttcgtcgccgatacactcgggcagatt
caggtaggggccgatggaacgatttatctggctggatcgcagatcgcgcctgactttccc
tataccgtcgaggcctaccgccaccccatctactccattgggtacgctcagtctaaacag
tacctctttgccagcgccatcaatccgtcccatacgggctatacctggtcgacctatctg
ggcgaaggcttcgtcaatacaacagcgatggatacgaagggcaacttctatatcgcgggc
agctttgggctaaattcgttgcccttcaaagatgcggttgccgctgacagtcccggcgct
ggagccttcattttggggcttacgccaaagggtgatctggtaagctccaccggcttcggc
ggacgggtgatctcacaagtcccaaatggcatggcgatcgatccgtcaggtaacatttac
atcgccggtacggcaaattctttgtcgatcaataatggctttccttacggcttctacgac
cccatcaacgttggcacaggcaccgcatataccgaccaggcgagatctggtagctattcg
agcttcatagcgaagatcgcgccgacaaatcagccgcagatcagcctcacctatagcggg
ccaatgctcgagctccgcaatgcaggcagcgcagacctgcatatcgtcagcattgtgccg
ggtaacagcatcacttcgatcatcaatgcctgcggtactactgtggcagcagcaagctcc
tgctttctgaccccacttagtacaacgcgaggtggaacccttacgatcaatagtgatgcc
cagccctcttcccagaccttcacgcccactggccttgcaagctctcttggcgcagtggtg
tacgtcgatagcagccaattgaacatccctcctacgcagaacggaacaaccagcgtggca
aagccactctatatctggaacctgggcaacgccggggtcgctatcagctccatcctcacc
ttcgggtggacctcgcagacgaacgactgtcccgccatactcgcgcctggcacgttctgc
acagcgagcgttaccgtgaaacccgtttcggcgggcgcgcccagtggctcgtacgatatc
ggggtggtctacggcagtgggagccgtgtcgatgtctatcctaacttcacgccaaatcca
gtggatgggcccctgttgttttctgccgacaggagcctgcaatatggtaatgtccagctc
gggacaacgtcgctgattcgtaccgtaacgatcaccaatagcggaaccgcacctgtcact
gtagacgtgccgtccttctccggcgatggagccagtagctttacggttgcagcaaacacc
tgcgcaggcatcgctcttgcgtctcaggcgagctgtgtgatcggtgtcagttttgagcct
ctgcaggctgggcgtcttgcggtgccgatgcttttgtctggcggtggttcgtccacgaca
atctacgttatcggtacaggcatcagcacgcccagtctctcaatcaatccaggttccttc
gactttggcaacgtcgtgcctggcaccacagcgacccaaaccgtgcagattaaaaacacg
aacgccacggagatcgctctcactagcattaccgcaggcgctgcagacggtggcttacag
cccgattacagccaaacgaatgactgcggcgctacgcttgcgtccaatgcgagctgctcc
atcacggttacatttgggccgtcggttctgggaatgcgtaaaggagccgtcacgcttatg
atcgatggcggcgccctgacatcgaaagtattgctgacaggcaccggagttcctgcattt
cttgcagctcctaactcgttgtccttctcttctactcctgtcggcagtaaggtgtctcag
agcatatctctggtcaatcagtccagcatgtcgctcgcacctgtactgacaactacggct
ccgttctcgatcgattcaacgacttgtaacggtccgctcgccgctggaacaagttgctta
attttcgttggcttccagccagactctaatggtcctcaggctgcggtgctcaccgttgct
tccggggaggtaaatcctatcacggtaccactctcaggaaccgggactgtctccgcaatc
acgctttcgccgacatccctgactttcgaaggggcaaacattggcacttccgcagcagct
cagacgatagctctcacgaactctggcgccgctccccttacggcgctcacttttgggatc
tccggtgtcaatcccgaggactttaagctgacgacaacgtgcggcatctccctcgcttcc
cagcagagctgtctcctcaatgtcgtcttcacgccctcgagcgccggtgctgaaagtgcc
acgcttttcatttccagcaatgctgccaccggtccggcaacagtcgcattggttgggacc
gggaacagctctggtctcgctctgtctacctcctcccccagcgccacaatctccggcggt
tcctccgctccctacacactagtgcaacaaccgcgaccaggcgcaacgggaactatcact
ttcacgtgtgcagatctgccgctatacgcggcgtgcagcttttctcccgcgagtctgtcg
attgctaatggaggcagtacaacgcttaccgtcacaacttcccaaacgcagacggctgcg
cgccgccaaccgataaatattgaggccgcaggttgtctcgcgagcttatttttgttgccg
gttgtgcgaagacgctcttggttgactctactatcctgcctcctgctgttcgcattcgtg
ggtataggaggatgcgcctcatcctcaaagccatcttccctatcctcaaccaatctcacg
ccgaaaggaacatacactttccacgtgattgcaagtgcgggcactcagatgcagacgatt
cctttgacgctgacagtacagtaa
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integrated database retrieval system
