Edaphobacter sp. 12200R-103: GWR55_01890
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Entry
GWR55_01890 CDS
T06408
Name
(GenBank) LPS export ABC transporter periplasmic protein LptC
KO
K09774
lipopolysaccharide export system protein LptA
Organism
eda
Edaphobacter sp. 12200R-103
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eda02000
]
GWR55_01890
Transporters [BR:
eda02000
]
Other transporters
Pores ion channels [TC:
1
]
GWR55_01890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD_N
LptC
Motif
Other DBs
NCBI-ProteinID:
QHS50632
UniProt:
A0A6B9YLI6
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Position
431783..434233
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AA seq
816 aa
AA seq
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MRVSVDRLRKGLLAGAGLLLLVIGGFLTYAHYRTHRFLKELPSKLGADIRQETNSFTWSQ
TVKGKTIFTIHAAKAIQHKNGKYTMHDVGIVVYGKGEGQASRVDRISGNEFELDQAEGIV
RATGEVHLDLQAPASGSNAIQPIDPVAVQDEDHKNAKLIHVKTSNLVYQQKQGIATTDQE
IEFEYNGLTGHATGADYNADTGVLLLHSAVKVSGINNGKPILLSATHGELDRRDRRIVLA
QARFVTSDAENSDPASRQTVEARQATALLRTDGAVEKISGDAVILTSGDGSRIASQHGEM
LLTGVSKPASMWMAGNVRYSFKEPDRDVTGEASTMRTSFDPQGHPAKVVLQGAVHLLEHV
SPSKISQGATERELTAAKVELEMATELGKRSWLRKAVATGDARLRISEPEKESAGMRQSA
IRGDLLTAQFVSQDGKENLASVHGQGSASLEQRRPDGSVKTSSADLLDATFRRVSTDQAT
ATSYSDGRETLDTASLSGHVVLTNLPRGKQQPEDSASADRAIAQRASYDARTGRVLLTGA
VELRDQQSVLWADRVSLNQGTGDASAAGKVKANFQQNSSSEPVHVLADRADLKKSNDTAI
FYGAAHPARLWEGASQIEAPVLQFDRARQRLIARGTRSATGAAVQTVLVSTGDRTRHREP
AVIRITSQEMDYSNEKHTADFTGGVKVDSTDGTMHGKQAIAYFSSSLQDKQNNKSAQKPG
FLQSGVERVVVNGDIVIRQHERQATGNQLVYTANDGTFVLTGTAQHPPKVMDAMRGTITG
RELRFREQDASVVISNGDANETGPRVRTETRVKKEP
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtttcggtagatcggctacggaaggggttgctcgcaggtgcgggccttctgctt
ttggtaatcggcggctttctgacgtacgcgcattaccgcacccaccgctttctgaaagaa
ctccctagcaaattgggcgctgatatccggcaggagacaaactctttcacctggtctcag
accgtaaaaggaaagacgatcttcaccatccacgccgcaaaagcgattcagcataagaat
ggcaagtacaccatgcacgacgttggaatcgtcgtctatggaaagggagaggggcaggcc
agccgggtcgatcgtatctccggaaacgagttcgagctggatcaggcggagggcatcgtc
agggccacgggagaggtccatctcgatctccaggcaccggcatccggcagcaacgcgatc
cagccgatagatcctgttgcggtgcaggacgaagaccacaagaatgcaaagttgatccac
gtcaagaccagtaatcttgtgtatcaacaaaagcagggcattgcgacgaccgatcaggag
atcgaattcgaatacaacggtctgaccggacatgccacgggcgccgattacaacgctgac
accggcgttctgttattgcactcagcggtgaaggtcagcggaatcaacaatggcaaaccg
attctcctgagcgcaactcacggtgaactggaccgcagggaccgtcggatcgttctcgcc
caggcccgatttgtcaccagcgacgctgaaaatagcgatccagcatccaggcaaaccgta
gaagcgaggcaagcaaccgcacttcttcgcacggacggagctgttgaaaaaatttcaggc
gatgccgtcatcctcacttcaggggatggctccagaatcgcatctcagcatggcgagatg
ttgctgacgggtgtaagtaagcctgcgtccatgtggatggccggtaacgtacgctacagc
ttcaaggagccagatagagatgtaacaggagaggcctcgacgatgcggaccagcttcgat
ccccaggggcatccggcaaaggtagttcttcagggcgcagtgcatctgctggaacatgtt
tccccttcaaagatctcgcaaggagctactgagcgtgagctgactgcggccaaagttgag
ctggagatggcgactgagttgggcaaacggtcgtggctgcgcaaggcggtagcaaccggc
gatgcccggctgcgcatctccgaacctgaaaaggaatccgcgggtatgcgtcagagcgcg
attcgcggagatctcctcactgctcagtttgtatcgcaggatggcaaggaaaatcttgcg
tcggtccacggtcaaggctctgcatcgctggagcagcggcggcctgatggttccgtgaag
accagctctgccgacctcctcgatgcgacgtttcgtcgcgtcagcacggatcaggcaacg
gcgacgtcgtattctgacggtcgagagacgcttgatacggcctccctctccggccatgtc
gtactcacgaaccttccgcgtgggaagcagcagcctgaggactctgcatcagcggatcgg
gcgatagcacaaagggccagctatgacgcgcgcaccggccgcgttctcctgacgggtgct
gtcgaattgagagatcagcaaagcgtcctttgggcggaccgagtctctctcaaccagggg
acgggagatgcctcagcagcgggtaaggtaaaagcgaactttcagcaaaactcgtcaagc
gagccagttcatgtccttgcagatcgcgcagacctcaaaaaatcgaatgacacggcgatc
ttctacggcgctgctcaccctgcgcggctttgggaaggagcctctcagattgaggcccct
gtgctgcagtttgaccgtgccaggcagcgcctcatcgcgcgtggtacacgctcagccact
ggagctgcggttcagactgttctcgtcagcaccggagaccgaacccgacatcgcgagcct
gcggtcattcgcatcaccagccaggagatggactattccaatgagaagcacacggcggat
tttaccggcggtgtgaaggtcgatagtaccgatgggaccatgcacggaaagcaagctatt
gcgtacttttcttcttcactgcaggacaagcaaaataataagtcagcgcagaagcctggt
tttctgcaatctggcgtggaacgtgttgtggtcaatggagacatcgtaatcaggcagcac
gagcggcaggccacaggcaatcagctggtctacaccgccaacgatggtaccttcgtcctt
acaggaacagcacagcatccgccaaaggtgatggacgctatgcgcggtaccatcaccgga
agagagttgcgcttccgcgagcaggatgccagcgttgtaatttctaatggagatgcaaac
gagacgggccccagggtgcgcacggagacgcgggtgaagaaagagccatga
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