Edaphobacter sp. 12200R-103: GWR55_01935
Help
Entry
GWR55_01935 CDS
T06408
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GWR55_01935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eda03400
]
GWR55_01935
Enzymes [BR:
eda01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GWR55_01935
DNA repair and recombination proteins [BR:
eda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GWR55_01935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QHS50639
UniProt:
A0A6B9YLX4
LinkDB
All DBs
Position
442343..443260
Genome browser
AA seq
305 aa
AA seq
DB search
MTGEAEQQLRAYVEYLRDLGVYNLYRRGDPVFEKAEQEQPVATASAAAHASEQVTVAPVQ
APVLTASSMRTIPQPAQPTPATPLTLRASSEPEIPKLISFNDLAPLPEVRHEPAAKSAAL
EAIREEIGDCTRCPLAYAGRHKIVFADGDPNARLMFVGEGPGADEDAQGLPFVGKAGQLL
NNMITAMGLKREQVYIANIVKCRPPANRVPEPVEANTCSQFLLRQIDVVQPQIIVALGST
AATYLLGRKQSLAGLRGIWHSCRGAKLAVTYHPAFLLRDPRQKGEAWKDLQMVMKEMGLK
APGKG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagaggcagagcagcagctgcgcgcctatgtcgaatatcttcgcgacctgggt
gtctacaatctgtatcgtcgaggcgatccagtcttcgaaaaagcggagcaggagcagccg
gtagcgactgcctccgcggctgcccacgcttcagagcaggtaacggttgcgccggtgcag
gcgcctgtactaaccgcgtcttccatgaggacaattcctcaacctgctcagcctacccct
gcaactccgctcactttgagagcatcttcggagcccgagattccaaagctcatcagtttt
aacgaccttgcccctctgccagaggttcgccacgagcctgccgccaagtccgcagctctg
gaggcgatccgggaggagataggcgactgtacgcgctgtcctcttgcatatgcgggccgg
cacaagatcgtctttgcagacggcgaccccaatgcgcggctgatgtttgtcggcgaagga
ccgggagccgatgaggacgctcaggggcttccgtttgtcggcaaagcaggacaattgctg
aacaacatgatcacggctatgggactcaagcgcgagcaggtctatatcgccaatatcgtc
aaatgccgtccaccggcaaaccgagtccctgagcctgtcgaggcgaacacgtgcagccag
tttctgcttcgccagatcgacgtcgtgcagcctcagatcatcgtggccttaggatcgacg
gcggcaacctaccttctcggcaggaagcagtcactcgctggacttcgcgggatatggcat
agctgtcgcggagcaaagctggctgtcacgtatcatccggcgtttctattgcgtgacccg
cgtcagaagggcgaggcgtggaaggaccttcagatggtcatgaaggagatggggctgaaa
gctcccgggaagggctga
DBGET
integrated database retrieval system
