Edaphobacter sp. 12200R-103: GWR55_01960
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Entry
GWR55_01960 CDS
T06408
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GWR55_01960 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eda03400
]
GWR55_01960 (priA)
Enzymes [BR:
eda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GWR55_01960 (priA)
DNA repair and recombination proteins [BR:
eda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GWR55_01960 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_Ribbon_YjdM
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QHS50644
UniProt:
A0A6B9YMJ9
LinkDB
All DBs
Position
447064..449556
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AA seq
830 aa
AA seq
DB search
MPQFCEVALPVPLDQTFTYMVNGTVPLVGARVLVPFSGQKLMGVVIRVHTETPAEDIEIK
PIQQVLDDAALLPDELMELARWISQYYLAPLGEVLRGMLPLGAEVRRHFIYSITEIGRKV
LYDGAERGASRRSRLSPEEQNREYSVLNYLDNGEAAKMSALRSATGANKALLDGMVRKKW
LLRQAIAEERDARRLVKVAVLVEDARLPKLNANQTAILAELAAIGGRIQVRDLKESLGRK
GVPESTLGTLVKRGLVCIEDAAEEFHFGGVAAHGKKHAHEHTLNEVQTEALSSVAIAMTQ
EGFKPHLLYGVTGSGKTAVYFAAMRRALDAGKSALLMVPEIGLTPAMTGQLVAAFGDEVA
LLHSQLTPDERAEQWHRIRRGEARVVVGTRSAVFAPVRDLGLIIVDEEHDGSYKQEETPR
YHGRDVAVMRAKLNGAVVVLGSATPSLESWANAENGRYTRIEMRKRVADRPLPAVELVDM
RNEFRETGQEQLFSRRLIEETEATIARGEQVIILLNRRGYSFVVMCRGCGEKIECENCAI
SMTYHKPVGGDDAIAQPGQRLECHYCGFRRGVPRECPKCQSEHLYFLGAGSQQGEERLQG
IFPHARIGRMDRDTVRGRSDMERLLARLHAGEINLLVGTQMIAKGHDIHGVTLVGVVGAD
FALGLPDFRAAERVFQLLTQVSGRSGRGELPGKVLVQTYHPDHYAVKFAAEHDYPGFVAK
EMQYRRWMHYPPFGVLANVVIQSERFEEATGWSAELGRWFRGATLGKVRVLGPAAAPISR
IKRIYRFHFVVKGETRSALSEALRGMLRFAGTREIPRRSLVVDVDALHLM
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagttttgcgaagttgccctcccggttccgctggatcagaccttcacctacatg
gtcaacggaactgttcctctcgtgggcgcgcgcgtactggttcctttcagcggacaaaag
ctgatgggggtggtcattcgagtgcacacagagactcctgcggaggacatcgagataaag
ccgatccagcaagtgctcgatgacgcagctttgctgcctgatgaattgatggaattggct
agatggatctcgcagtattaccttgctccgttaggcgaggtgttgcgagggatgcttccc
ctgggtgcggaggtccggcgacacttcatttacagcatcacggagatcggtcgcaaggtt
ctgtacgatggcgcggagcgtggagcctcgcggcgctcccggctaagtccggaggaacaa
aaccgcgagtattctgtgctgaattatttggataatggcgaggctgcgaagatgtcggcg
ctgcgctcggctactggagccaataaggctttgctggacggcatggtccgcaagaagtgg
ctgctgcgccaggccatagcggaagagcgggatgcccgacgtctggtgaaggtggctgtg
cttgtcgaagatgcccgtctaccgaagctcaatgcgaatcagacagccatcttggctgag
ctggctgctataggcggacggatccaggttcgcgatctcaaggaatcgctggggcgtaaa
ggcgttcccgagtcgaccttgggaaccctggtgaaacgcggcttagtgtgcatcgaggat
gcagctgaggagtttcacttcggtggtgtagcagcgcacggcaagaaacacgcccatgag
cataccctgaacgaggtccagacagaggcgctcagctcagttgcgattgccatgacgcag
gaaggtttcaagccgcatctgctgtatggggtgacagggagtggaaagaccgccgtctat
ttcgctgctatgcgccgggcgctggatgcaggcaaatcggcgctgctgatggttcctgaa
attgggctgacgccggcgatgaccggacagctggtggcagcgttcggagatgaggtggct
ctgctgcactcacagttgacgccggacgagcgggcggagcagtggcatcgtatccggcga
ggggaagctcgcgtggtggttggaacacggtcggcagtctttgcgccggtgcgcgacctt
ggcctgattatcgtggatgaagagcacgatgggagctacaagcaggaggagacgccgcgc
tatcacggacgcgacgttgccgtgatgcgcgccaagctgaacggcgctgtcgtcgtgctg
ggttctgcgacaccttcacttgagagttgggcgaatgcagaaaatggtcgttatacgcgg
atcgagatgcggaagcgagtagccgacaggcccctgccggcggttgagctggtggatatg
cgcaatgagtttcgcgagacaggccaggagcagctgttttcgcgacggctgatcgaggag
actgaagccactattgcgcgcggtgagcaggtgatcattcttttgaaccgccggggatat
tcgtttgttgtgatgtgccggggctgcggtgagaagatcgagtgcgagaactgcgcaatc
tcgatgacttatcacaagccggtaggcggcgatgatgcgattgcacagcccgggcagcgg
ctggagtgtcattattgcggcttccggcggggcgttccgagggagtgcccgaagtgtcag
agcgagcacctctattttctgggggcgggatcgcagcagggagaagagcgcctgcaggga
atctttccccatgctcgcatcggccgaatggaccgcgatacagtgcgtggtcgaagcgac
atggagcggttgctggcccgtctccatgcgggcgagatcaacctgctggtcggcacccag
atgattgccaaagggcatgacattcacggggtgacattggtgggagtcgtgggagcggac
ttcgcgctggggctgccagacttccgcgccgccgagcgggtcttccagctcctgacgcag
gtctcaggcaggtcgggcaggggagagcttccaggcaaggttctggtgcagacgtatcat
ccggatcactacgccgtgaagtttgcggcggaacacgattaccccggcttcgtagcaaaa
gagatgcagtaccgccgctggatgcactatccgccgttcggtgtgctcgccaatgtggtg
attcagagcgaacgattcgaagaagcgacggggtggtcggcagagctgggacgatggttc
cggggagccaccctgggcaaggtcagggtgctcggccccgcagctgccccgatctcgcgt
attaagcgaatttatcgcttccactttgtcgtcaagggcgagaccagaagtgcgttgagt
gaggctctccgtgggatgcttcggtttgcggggacgcgcgagatcccacgacggagtctc
gtcgtcgatgtagacgctctacacctgatgtag
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