Edaphobacter sp. 12200R-103: GWR55_02465
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Entry
GWR55_02465 CDS
T06408
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GWR55_02465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eda03400
]
GWR55_02465
Enzymes [BR:
eda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GWR55_02465
DNA repair and recombination proteins [BR:
eda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GWR55_02465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
QHS50735
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All DBs
Position
583996..584862
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AA seq
288 aa
AA seq
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MATAKKRIGVHVGTAGGVWTAVDRAVAAGANTFQIFSSSPRMWKAAAVKPADAAKMQELR
AKHDVNPVAIHASYLINLCSQTDSVRANSTTAFRGEVERALVLGAEFLVLHPGSWKGLTR
EQGLTYAAQSIEKAIDGIDFAGKNFKILIENTAGAEFSLGGKLEQVAELVDCLKACAPVA
VCLDTCHVHVSGYDIVSTDGYIETMKLVESTVGFDAVKVWHCNDAKAAMGSKLDRHEHIG
EGTIGAEAFRRLLHDERFSHCAFIAETPVDDPGDEARNVGVLRTLAAG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcgaagaagagaatcggtgtgcatgtgggaaccgcaggcggagtctggact
gcggtagatcgggcggtggctgcgggcgcgaatacgtttcagatcttttcctcgagtccg
cggatgtggaaggcggcggcggtcaaacccgcggatgcggcaaagatgcaggaactgcgg
gcgaagcacgatgtgaatccggtggcgatccatgccagctatctgatcaacctctgcagc
cagaccgacagtgtgcgggcgaattcaacgacggcgtttcgtggtgaggtggagcgagca
ctcgtgctgggagcggagtttctggtgctgcatccgggaagctggaagggactgacgcgc
gagcagggcctgacctacgcggcgcagtcgatcgaaaaggcgatcgacgggatcgacttt
gcgggaaaaaacttcaagattctgattgagaacacggcaggagcggagttttctcttggc
gggaagctggagcaggtggccgagttggtggattgcctgaaggcgtgcgctcccgtagcc
gtatgcctggatacatgccacgtccacgtttcgggctacgacatcgtttcgacagatggc
tacatcgagacgatgaagctggtggaatcaaccgtcggttttgacgccgtgaaggtatgg
cactgtaacgatgcaaaggcggccatgggttccaagctggaccggcatgagcacattggc
gaaggcacgattggcgcggaggcgtttcgccggttgctgcacgatgaacgcttcagccac
tgcgcgtttatcgcggagaccccggtggatgatcccggcgatgaagcgcgaaatgttggg
gtgctgagaacgctcgcggcgggatga
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