Edaphobacter sp. 12200R-103: GWR55_02710
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Entry
GWR55_02710 CDS
T06408
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
K11720
lipopolysaccharide export system permease protein
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GWR55_02710 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eda02000
]
GWR55_02710 (lptF)
Transporters [BR:
eda02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
GWR55_02710 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
QHS50777
LinkDB
All DBs
Position
complement(637741..640098)
Genome browser
AA seq
785 aa
AA seq
DB search
MRIFTRYILREVASHALIGGVLFTFVLFMRDLGHILELVVRDSASVTDILRIFAYLLPSF
LIVTIPMSVLVGILLGLSRLAADSEITAMRAAGMGVLSFVRIVSIVSAFAVALGLFNSLY
LAPRSAAGTLALENSLKSTQASFEVQPRVFYEDFRNYVLYIQDVRPAAGAALWHHVFLAD
LTQPANPNITTADQAVVVSNDPKSIRLHLIDGGQHQTSPTDPNQYNISTFASTDLPIQTG
LQEDTHLGRSDTPILALTLPELWRLGYSADSRARLYRIELNRRFSYPFACVVLMLIGVPL
GLSSKRGGKSTGFVLTIALVFIYYFLSQIGIAFAKNGKVSPFLGVWGANLLFAAAGVLLL
YQMSQGGIALGLISSLGTQLNKLLTRSQRGRQLAASGGRIHISTILRRFRNTFHIQFPLL
LDDYVMREYMKNFALILSSFSALFLIFTFFELTGDIIRNRTPLVTVGDYLINLIPFILYN
VTPLCALVAVLVTFSALSRSSEITAMKATGVSLYRIVTPVLITTLLIAGCLFAFDELYLP
AANRRQEALRNVIKDKPAQTFLRPDRKWISGQAGPSDSPTRIFYYQFFDAAKNVFANLTV
FEFDPNTFALKRRIFASSAHWNERVGQWVFENGWERSFAGDTIASYHPFTVTAFSDIHEQ
PSYFVKEDRPAQEMSYNELSRYISDLNQSGFDTKRLSVQLNRKLAYPLITLVMAILAIPF
ALSMGKRGSLAGIATAIALAVAYWVVDGLFQAMGNVNTLPAMLAAWSPDILFGIAGTYLL
LRTST
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcttcacccgctacatccttcgcgaagtcgcctcccacgcactgatcggtggt
gtcttattcaccttcgtgctgttcatgcgcgatctcgggcacatcctggagctggtcgtc
cgcgactcggcctccgtgacggacatcctgcgaatttttgcctacctgcttccaagcttc
ctcatcgtcaccatcccgatgtcggtcctggtcggcatccttctgggtctctcgcgcctg
gccgccgactccgagattacagcgatgcgtgccgcaggcatgggagtgctcagctttgtc
cgcatcgtctcgatcgtctccgcatttgccgtcgcgctggggctcttcaactcgctctac
ctggctccccgatcggccgcgggaacgctggcgctggaaaactcgctcaaatcgacgcag
gcgtccttcgaagtacagccgcgcgtcttctatgaagacttccgcaactacgtcctctac
atccaggacgttcgtccggcagccggtgcagcgctttggcaccacgtcttcctcgctgac
ctgacacaacctgcaaacccgaatatcacgaccgctgaccaggctgtcgtcgtctccaac
gatcccaaaagcatccgcctccacctgatcgacgggggacagcatcagacctcgccgacc
gatccgaatcagtacaacatctctaccttcgcctcgaccgatctccccatccagaccggc
cttcaggaagacacacatctcggacgctccgacacgccgattctcgctctcacgttgccc
gagttgtggcgcctcggctactccgcagacagccgcgcccgcctctatcgcattgagcta
aaccgccgcttctcctatcccttcgcctgcgttgtcctcatgctcatcggtgttccgctg
ggactctcctccaagcgcggcggcaaatcgaccggcttcgtccttaccatcgcgctcgtc
ttcatctactacttcctctcgcagatcggtatcgccttcgccaaaaacggcaaggtctct
ccctttctcggcgtctggggtgcgaaccttcttttcgccgccgcaggagttctgctgctc
taccagatgtcgcagggaggtatcgcgcttggcctgatctcctcgctaggaacccagctc
aacaagctgcttacgcgctcgcagcggggacgccagcttgccgcctccggcgggcgaatt
cacatctccacgatccttcgccgcttccgcaacaccttccacatccagttccctctcctg
ctcgacgattacgttatgcgggagtacatgaagaacttcgcgctcatcctgtcgtccttc
tccgcgctcttcctcatcttcaccttcttcgagctcacgggcgacattatccgcaaccgc
acgcccctcgtcaccgtcggcgactatctcatcaacctgattcccttcatcctctacaac
gtcacgccgctttgcgctctggtcgcggtcctggtcaccttcagcgcactcagcagatcc
tctgagatcaccgccatgaaggcaacgggcgtcagcctctatcgcatcgtgacacctgtg
ctcattaccaccctgctgatcgccggatgtctctttgccttcgacgaactttatctaccg
gcagccaatcggcgtcaggaggcgctgcgcaacgtcatcaaagacaagccggcccagacc
ttccttcgcccggatcggaagtggatctccggtcaggcaggaccatccgactcgccgact
cgtatcttctattaccagttcttcgatgccgccaagaacgtctttgcgaatctgaccgtc
ttcgagttcgatcccaataccttcgcactgaagcgcagaatctttgcctcttccgctcac
tggaacgagcgtgtcggccagtgggtctttgaaaacggatgggagcgctccttcgccgga
gacaccatcgcatcctaccatccgtttactgtcactgccttctccgacattcacgagcag
ccgtcttacttcgtcaaagaggatcgcccggcgcaggagatgagctacaacgagttgtca
cgctatatctccgatctcaaccagtccggcttcgacaccaagcgcctcagcgtccagctc
aaccgaaagctcgcgtatccgctcatcacactggtgatggctatcctcgcgattcccttc
gcactctcgatgggcaaacgcggctctctcgcaggcatcgcgacggcaatcgcactcgcg
gtcgcctattgggtcgtcgatggtctcttccaggcgatgggtaacgtcaacacgcttccg
gcaatgctggcggcctggtctcccgatattctcttcggcatcgcaggcacgtacctgctc
ctccgcacctccacgtag
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