Edaphobacter sp. 12200R-103: GWR55_03260
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Entry
GWR55_03260 CDS
T06408
Name
(GenBank) Cys/Met metabolism pyridoxal-phosphate-dependent protein
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda00450
Selenocompound metabolism
eda00970
Aminoacyl-tRNA biosynthesis
eda01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GWR55_03260
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GWR55_03260
Enzymes [BR:
eda01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
GWR55_03260
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Motif
Pfam:
SelA
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QHS50869
UniProt:
A0A6B9YMJ5
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Position
792176..793795
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AA seq
539 aa
AA seq
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MSSLTNGKWSRREILKQSGILSALGATSAVSPIVGCARPAGDQAAAANTLVHHHDMGDNL
FTRIGVRPMVNGRGTYTIISGSCSLPEVKQAMYDASFYFVHLDEMMNGIGAQLAELTGAE
WGITTTGCAAAICLATIACIAGTDIEQCQALPYTKKKDQVIIPKHSRNPYDIGVRMCGVE
IVEVDSPEEFRAKLSDRTAMVYILSGPQSTSGPMSISALCKIANEKNVPVFVDAAAEEPV
KPNIHIAAGASLVGYSGGKCMRGPQSSGMMLGKKDLCQAAFYQASPHHCYGRALKCSKEE
AMGLLAAVRQWYKRDHAAEQAQWLGWMQHIADKVKGIPNVTAQVIPAQEDLSNRCATLKI
TWDASKVGITGTEVNARLDEGNPRIALIGAQGRRPDMMQSSIGVTSYMMQAGDEKTIADA
LYEILTHPGSHPNPPVPTGTPASVKGTWAVTIHYLRGTGEQKFVLKQNGNEVTGEHHGEI
YNATFKGAVHGDQIELHSVMPVGGNPLHCNFKGTVTGGNISGTVNMGEYGDAQWSAVRA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgctcaccaatggaaaatggtctcgtcgagagattctcaagcagtccggcatt
ctttcggctcttggagccacttctgcggtctctccgattgtgggctgcgcccgtccagcg
ggggatcaggctgctgccgcaaataccctcgttcaccaccacgacatgggggacaatctg
tttacgcgcatcggtgttcgccctatggtcaatggccgtggaacctacaccatcatcagc
ggttcctgctctctgcccgaggtcaagcaggcgatgtacgatgcctcgttttacttcgtg
catctggacgagatgatgaatggcattggcgcgcagctggcagaattgaccggagcggag
tgggggatcaccaccacgggttgcgccgccgccatctgtcttgcgaccatcgcatgtatc
gctggcaccgacattgaacagtgccaggcgctcccctacaccaagaaaaaagatcaggtc
atcatccccaagcactcccgcaacccctatgacattggcgtacgcatgtgtggcgtcgaa
atcgttgaggtggactcgccggaggagttccgcgccaagctctctgatcgtactgcaatg
gtctacattctctccgggccgcaatcgacctccgggcctatgagcatcagtgccctctgc
aagatcgcgaacgaaaagaatgttcccgtttttgtcgatgctgccgcagaagagccggtc
aagcccaatattcatattgcagcaggagcttcgctcgtcggctactcaggtggaaagtgc
atgcgtggtccccagtcctccggcatgatgctcggaaagaaggatctatgccaggcggcc
ttctatcaggcgtccccgcaccactgctacggccgtgcgctgaagtgcagcaaggaagag
gcgatgggtctgctagccgccgtgcgccagtggtacaagcgggatcatgcagccgaacag
gcgcagtggctcggctggatgcagcacatcgctgacaaagtgaagggaatcccgaacgtg
actgcgcaggtcattcctgcacaggaggacctctccaatcgctgcgcgactctcaagatc
acgtgggatgccagtaaggttggcatcacgggaacggaagtgaatgctcgcctggatgaa
ggtaatccgcgcattgctctgatcggtgcccagggacgtcggcctgacatgatgcaaagc
tccatcggcgttacgtcttacatgatgcaggcaggagacgaaaagaccatcgcggatgct
ctctatgagattctcactcatcccggttcgcatccgaatccccctgtgccaacaggtacg
ccggcgtcagtgaagggaacctgggcggtcaccatccactatctgcgtggaacgggagag
cagaagtttgtgctgaaacagaacggaaacgaggtcaccggagaacatcacggtgagatc
tacaacgcgaccttcaagggcgctgtccacggcgaccagatcgagctccacagcgtgatg
ccggttggcggaaatcctctgcactgcaacttcaaggggactgtcaccggcgggaatata
tccggtaccgtcaacatgggcgagtatggtgacgcccagtggagtgcggttcgagcctga
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