Edaphobacter sp. 12200R-103: GWR55_04280
Help
Entry
GWR55_04280 CDS
T06408
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
eda
Edaphobacter sp. 12200R-103
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_2
AAA_16
ATPase
TIP49
bpMoxR
AAA_3
FleQ
Parvo_NS1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QHS51044
LinkDB
All DBs
Position
complement(1021081..1022529)
Genome browser
AA seq
482 aa
AA seq
DB search
MPDITTDAAEESTSRRAADHIAGNPRILIIDDEAGIRDSLETMLTLEGFTVTLAIDGVSG
MEQLSRNQFDLLLLDLALPGESGLDLLPRIVEMYPTLPVIMITAFGTMGNVVDAIRAGAE
NFVQKPWDNEKLLADIRTAIARHRAEEEVVQLKRTLKQRYNFENIVGKSEPMLKLFDLVS
QVAPSRSTVLIQGESGTGKELIAKAIHANSPRRDHPFVPVNTGAVPSELLESTLFGHVKG
AFTSAIAAKKGLFEVANSGTLFLDEIGTMTMDMQAKILRVLQDRRFMQLGGTQEIQVDVR
IIAATNVNLQDAVRAGRFREDLFYRLNVITLELPPLRSRREDVPLLAGHFLRLYSNENGM
EERTLSPEAMRILMDYEWPGNVRELENAMERGVVLSTGKIIQPELLPQQLTGNTYSATLL
EQQPNASLFDLMEEIERRIITDRLERCHWNQTEAAEYFRIPLSTLNQKIKRLNVEIKKRN
RE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacatcaccacagacgcggccgaggagtccacctctcggcgcgcggcagatcat
atcgctggaaacccccgcatcctcatcatcgacgacgaagccggcatacgtgattccctg
gagaccatgctgacgctcgagggattcaccgtcactctggcgatcgacggcgtctccgga
atggagcagctatcgcgcaatcagttcgacctgcttctgctggaccttgcccttccgggc
gagagcggcctcgaccttctgccacgcatcgtggagatgtatccgaccctgccggtcatc
atgatcaccgccttcggcaccatgggcaacgtcgtcgacgccatccgcgccggcgcggag
aacttcgttcagaagccgtgggacaacgagaagctgcttgccgacattcgcacggccatt
gcccgtcatcgcgcggaagaagaggtcgttcagcttaaacggaccctcaagcagcgctac
aacttcgagaacatcgtcggcaagagcgagccgatgctcaagctcttcgacctcgtctcc
caggtcgcgcccagtcgttccacagtgctgattcagggagagagcggcaccggcaaggaa
ttgatcgcgaaggccattcacgccaactctccccgccgcgaccaccccttcgtccctgtc
aatacgggagccgttccctcggagctgctcgaatcgacccttttcggtcacgtcaaggga
gccttcacctcggcaatcgcagccaagaaaggcctcttcgaagtcgccaacagcggcacg
cttttcctcgacgagatcggcacgatgaccatggatatgcaggccaagattctccgcgtc
ctgcaggaccgccgcttcatgcagctcggcggaacccaggagattcaggttgacgtgcgc
atcatcgccgccaccaacgtcaacctgcaggatgcagtgcgcgcaggccgcttccgcgaa
gacctcttctatcggctgaatgtcatcacgctcgagcttccgcccctgcggtcgcgccgc
gaggacgttcctcttctcgctggccacttcctccgcctctattcgaacgagaacggcatg
gaagagcgcacgctctcccccgaagccatgcgcatcctgatggactacgaatggcccggc
aacgtgcgcgagcttgagaacgctatggagcgcggcgtcgttctctccacgggcaagatc
attcagccggagctgctgccccagcagcttacgggaaatacctactcggctactctgcta
gagcagcagccgaacgcctccctcttcgacctgatggaggagatcgagcgccgcatcatt
accgaccgcctcgaacgctgccactggaaccagaccgaggcagcggagtacttccgcatt
ccgctctccacgctgaaccagaagatcaagcgcctgaacgtcgagatcaaaaagcgcaat
cgcgaatag
DBGET
integrated database retrieval system
