Edaphobacter sp. 12200R-103: GWR55_04685
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Entry
GWR55_04685 CDS
T06408
Name
(GenBank) HlyD family efflux transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
eda
Edaphobacter sp. 12200R-103
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
GWR55_04685
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GFIT
Motif
Pfam:
Beta-barrel_YknX
HH_MFP_RND
BSH_RND
HH_EMRA
Beta-barrel_RND_2
Biotin_lipoyl
Beta-barrel_AprE
HH_YBHG
BSH_CusB
BSH_YknX
BSH_CzcB
BSH_YhbJ
YknX_C
RND-MFP_C
Peptidase_M23
HH_CzcB
CzcB_C
DUF6380
GCV_H
Motif
Other DBs
NCBI-ProteinID:
QHS51109
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Position
1132095..1133495
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AA seq
466 aa
AA seq
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MSIKKIALIAVGVLILAGVIAGVIRHKQNSITKVATGHVVRQDIVSIVNGTGQIKPKTYV
NVGATAFGRITHLYVKEGDHVKRGQLVATVESEQPASAVQAQTATIAASKTDVQSYIAAE
RTAEANVAQAKADLEQKRFDYERARALYEDKLIAKQDYDAKKAAFDVSEATLQQRQASVA
QAKAQTASAHGHVEQAVATLRGNTYSLGLTQSRAPFDALVTNVPVREGETVVVGIQNAEG
STLMTLADMSVITAEVKVDETDIVNVALNQPVNVTVDALPGRVFKGHVTEVGDQALLRTT
GLATSQSTTGTEEAKDFKVVVTLDEISDDLKPGLSATAKITTAHRSDVLTIPIQALVQRN
PEMEKTLDQHDGKMPGTSGVAASTTPPTAKGEAITGVYVLRNDRKKLRAVFVPVKTGVTG
ATDIEVLGGLKQGDEIVTGRYKTLRTLKSGTTVKRDNTPETPAEGS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcaaaaagatcgccttgattgcggtaggagtcctgatcctcgcaggagtcatc
gccggcgttattcgccacaagcagaattccatcaccaaggtagccaccggccacgtcgtg
cgccaggacatcgtatccatcgtcaatggaactggccagatcaagccaaagacctacgtc
aatgtgggcgccaccgccttcggtcgaattacgcatctctacgtcaaagaaggcgaccac
gtaaagaggggccagctcgtcgctacggtcgagagcgagcagccggcctccgccgtccag
gcccagaccgcgacgattgcagcgtcgaagacggatgtacagtcctacatcgctgccgag
cgcactgccgaagccaacgtggcccaggccaaggctgatcttgagcagaagcgttttgac
tacgaacgcgctcgggcgctctacgaggacaagctgatcgccaagcaggactatgacgcc
aagaaggctgccttcgacgtatctgaagcgacgctgcaacaacgccaggcctccgtcgcc
caggcaaaggcgcagactgcctcggcccatgggcacgtcgagcaagccgttgctaccctg
cgcggcaatacctactcgctggggcttacacagagcagggcacccttcgatgcccttgtg
accaacgtccccgtccgcgaaggagagaccgtcgtcgtcggcatccagaacgccgaaggc
tccaccctgatgaccctcgccgatatgtcggtcatcaccgccgaagtcaaggtcgacgag
accgatatcgtcaatgtggctctgaaccagccagtcaatgtcaccgtggatgcccttccc
ggccgcgtcttcaaaggtcacgtcactgaagttggcgatcaggcgctgcttcgcaccacc
ggcctagccaccagtcaatccacgacgggaactgaggaagcaaaggatttcaaggtggtc
gtgacgctcgatgagatctccgacgacctcaagcccggtctgtccgctaccgcaaagatc
accacggcgcatcgctccgatgtactgactatccccatccaggcgctggtgcagcgtaat
ccggagatggagaagaccctcgatcagcatgacggcaagatgcctggaaccagcggagtt
gctgccagcaccaccccgcccacagccaagggagaggcaatcaccggcgtctacgtgctg
cggaacgaccgcaagaagcttcgcgctgtcttcgttcccgtaaagacaggagttaccgga
gccacggatatcgaggtattgggaggactgaaacaaggagacgagatcgttaccgggcgc
tacaaaactcttcgcaccctcaagagcgggaccaccgtcaaaagagacaacacgccggag
accccggctgaaggctcgtaa
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