Edaphobacter sp. 12200R-103: GWR55_04760
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Entry
GWR55_04760 CDS
T06408
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda00061
Fatty acid biosynthesis
eda00071
Fatty acid degradation
eda01100
Metabolic pathways
eda01212
Fatty acid metabolism
eda02024
Quorum sensing
eda04146
Peroxisome
Module
eda_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GWR55_04760
00071 Fatty acid degradation
GWR55_04760
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GWR55_04760
09145 Cellular community - prokaryotes
02024 Quorum sensing
GWR55_04760
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
eda01004
]
GWR55_04760
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eda04147
]
GWR55_04760
Enzymes [BR:
eda01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GWR55_04760
Lipid biosynthesis proteins [BR:
eda01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GWR55_04760
Exosome [BR:
eda04147
]
Exosomal proteins
Exosomal proteins of breast milk
GWR55_04760
Exosomal proteins of breast cancer cells
GWR55_04760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QHS51123
UniProt:
A0A6B9YPW0
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All DBs
Position
complement(1149715..1151502)
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AA seq
595 aa
AA seq
DB search
MFDLQTLNDVLVRATGRGDRVVMMAQESPTQWSSITSDQLYGRVRSLADALMTWGIGKGD
RVALLCENRWEWPVVDFAVLAIGAVDIPLYPTLTPDQIGYMLRDSGARAIFVSTQEQFQK
ICEAGELPDLEHVVVMDPGSYEGATAFSELMKDAAGRQQRDAAFDAMLQNVQPEDLATII
YTSGTTGEPKGVMLTHGNLASNLNYSTGPLGLGEEDVSISFLPLSHVTARHLDYALLCHG
TKLAYCVKFEQLAEAMKIVRPTIFVAVPRVYEKIRQAVEAKSAASPLKHRIFQWAFAVGK
QHRAEIITDRRPGGLAWKLAHKLVFSKIAEAFGGRTRIFIAGGAPLGIDTGGWFADAGIS
ILEGYGLTETSPVIALNYPDANKISTVGRSLENVQCRFAEDGELEVKGPSVFVGYWNKAD
QTREAFTADGWFRTGDIGNQDAEGFLSITDRKKELLKTSGGKLIAPQPIENKLKANTLVG
NAAMVGDKHKFACVLISPNVAALKSWASGQGVTVDDMESLAKDPKVVKAYEEIVGRVNQG
LAHFESIKRVCVVPDEWSVETDELTPSLKLKRRVIEKKYAKQIEEFYADEATSRA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatctgcaaacgttgaatgatgttctggtccgggccacggggcgcggcgatcgt
gtcgtgatgatggcgcaggagtcacccacgcagtggtcctccatcacatcggaccagttg
tatggccgtgtccgttctttggccgatgccctcatgacctgggggattggaaagggagat
cgcgtggccctgctgtgcgaaaaccgatgggagtggcctgtggtcgatttcgcggtactc
gccattggagcggttgatattcctctgtatcccacgcttacaccggatcagatcggctac
atgcttcgcgattcaggagcccgggcgatcttcgtctcaacccaggagcagtttcagaag
atctgcgaggcgggggaactgcccgaccttgagcatgtggtggtgatggaccccggaagc
tacgaaggagcgacggccttctccgagctgatgaaggatgctgccggaaggcagcagagg
gatgccgccttcgacgccatgctgcagaacgtccagccagaggacctggcaaccatcatc
tatacctcgggcacgacgggcgaacccaagggagtcatgttgacccacggaaaccttgcg
agcaatctgaattattccaccggcccgcttggactgggggaagaggatgtcagcatctcc
ttcctgccgctgtcgcacgtaacagcgcgccacctggactacgctctgctgtgccatggc
acgaagcttgcctactgcgtgaagttcgagcagcttgcggaggcgatgaagatcgtgcgt
cctaccatcttcgtcgccgtaccacgcgtctatgagaagattcgccaggccgtcgaggcg
aagtctgccgcatccccgttgaagcacaggatcttccagtgggcttttgccgtgggcaag
cagcacagggcggagattatcaccgacagaaggccgggaggacttgcatggaagctggcc
cacaagctcgtcttcagcaagattgccgaggcctttggcggtcgcacgcggatctttatc
gcaggtggagctccgctcgggatcgacacgggagggtggttcgccgatgccggcatctcc
atcctcgaaggctacggactcacggagacctcgcctgtaatcgcattgaactatcccgac
gctaacaagatcagcacggttggtagatcgctcgaaaacgtacagtgcaggttcgctgaa
gacggagagctcgaggtgaaaggaccgtctgtctttgtcggctattggaacaaggccgat
cagacgcgtgaggcctttacggcggatggctggttcaggacaggagatattggaaaccag
gatgccgagggatttctctcaatcaccgatcgtaagaaagagctgctaaagaccagcgga
ggcaagctgatcgcaccccagcccatcgagaacaagctgaaggccaacacgctggtgggc
aatgcagccatggtgggcgacaagcataaatttgcctgcgtattgatctcaccgaacgtt
gccgctctcaaaagctgggccagcggacaaggggtaactgtcgatgacatggaatcactg
gccaaagacccaaaggtcgtcaaggcctatgaagagatcgtgggtcgtgtcaatcaaggt
ctggcccacttcgagagcatcaaacgcgtatgcgtcgttccagacgagtggagcgtagag
acggacgagctgactcctagcctgaagttgaaacgccgcgtgattgagaagaagtatgca
aagcagattgaggagttttacgcggatgaggcgacctcccgggcatag
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