Edaphobacter sp. 12200R-103: GWR55_05005
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Entry
GWR55_05005 CDS
T06408
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
eda
Edaphobacter sp. 12200R-103
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
GWR55_05005
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Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND_2
Beta-barrel_YknX
BSH_CzcB
Beta-barrel_AprE
BSH_CusB
RND-MFP_C
BSH_YknX
YknX_C
Biotin_lipoyl
CzcB_C
BSH_YhbJ
FtsH_ext
VirB8
LcnD_C
Gp56
Psb34
BSH_Fcp1
Motif
Other DBs
NCBI-ProteinID:
QHS51164
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Position
1202279..1203487
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AA seq
402 aa
AA seq
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MATQRKQKRNLWIWGGIIVLVVAVILGVAVAARGNSARIEPSQLAKVEKGDIARSVVATG
KVQPITKVEVKSKASGIVTKLYVDINQHVKQGQVLAQLDQIEILAQVNAQKAQLAAAESN
ERAAQAAIQYDKVNAEAPDLPMFKHTYERALSMSRDGVVSQQALDDAEQKYLAATNTRDK
AVAQISVDTSKFHQAQAQVQQAQASLKQLQEQYSYTTITSPMDGVILSRDVELGDAVSSI
LVMGSTATLVMTIGDITQVYVQGKVDESDIGKVYMGQPARIKVESFKDKTFYGKVTKIAP
LGVEKDNVTTFEVRVSIDNPGGELKANMTANAEILLDEHKGVLTIPEQSVMYDKDRNASV
EIPDSKQKNGRRKVPIKAGISNGTRTEVLSGLKQGDTVILQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
ttggcgacacaacgcaaacaaaagcgcaatctctggatatggggcggcatcatcgtcctg
gtggtagccgttatcctcggcgtggccgtggcagcacgcggaaacagcgctcggatcgag
ccctcgcagctggccaaggtcgaaaaaggggatatcgcccgctccgtcgtcgcgaccgga
aaggttcagccaatcaccaaggtcgaggtcaagtccaaggcctcaggcatcgtcacaaag
ctttacgtcgacatcaaccagcatgtgaagcagggtcaggtactcgcccagctcgaccag
attgagattctcgcccaggtaaacgctcagaaggcccagctcgccgccgccgaatccaat
gagcgcgctgcgcaggccgccattcaatacgataaggtcaacgccgaagctcccgatctt
cccatgtttaagcacacctatgaacgtgccttgtccatgtccagagacggcgtggtctcc
caacaagctctcgacgacgccgaacagaaatatctcgcggccacaaacactcgagacaaa
gccgtagcccagatctctgtcgacacctccaagttccaccaggcacaggcgcaggtccag
caggctcaggcctcgctcaagcaattgcaggagcagtactcctatacgacgatcacctct
cccatggatggcgtcatcctttctcgagatgtcgaactcggcgacgcagtaagctccatt
ctcgtcatgggttctaccgctaccctcgtcatgaccattggcgacattacgcaggtctat
gtgcagggcaaagtcgatgaatccgatattggcaaggtttacatgggccagcctgcccgc
atcaaggtcgaatccttcaaagacaagaccttctacggcaaggtcaccaagatcgctccc
ctcggggtcgaaaaagacaacgtcaccacctttgaagtgcgcgtctccattgacaatccc
ggcggagagctcaaagccaacatgaccgccaacgccgagattttgctcgatgaacacaag
ggcgttctcaccatccctgaacagtccgtcatgtatgacaaggatcgcaacgcctcggtt
gagattcccgactccaaacagaagaatggccgtcgcaaggtccccatcaaggccggcatc
tcgaatggcacgcgtactgaggtcctctccggactcaagcaaggcgataccgtaatcctg
cagcagtaa
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