Edaphobacter sp. 12200R-103: GWR55_05865
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Entry
GWR55_05865 CDS
T06408
Name
(GenBank) glycoside hydrolase family 2 protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda00052
Galactose metabolism
eda00511
Other glycan degradation
eda00600
Sphingolipid metabolism
eda01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
GWR55_05865
09103 Lipid metabolism
00600 Sphingolipid metabolism
GWR55_05865
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
GWR55_05865
Enzymes [BR:
eda01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
GWR55_05865
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2_N
Glyco_hydro_2
Glyco_hydro2_C5
TcaA_3rd_4th
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
QHS51318
UniProt:
A0A6B9YNQ3
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Position
1391234..1393744
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AA seq
836 aa
AA seq
DB search
MLTRRTFIKSSALAASASTLSRSTLGASLAHLVDDTPASEKKTIRLSSGWEFLREPLGGL
WEVWHSKEIATWQAIEMPHCFNAYDGCDPDVPAYRGNGWYRLHLPVANPYPNGRTLLHFE
GAGQATTVYVGNTPVGHHVGGYDEFIFDITDAVEQHRSTSHSNGQQKGPEVPIAVLCDNS
RDLDRMPSDLSDFTLYGGLYRHVNLVYVPAVSLEQLHVKVDLPRADSSAEVRIVGTVYNP
AGNTTPITLALEIVSSDGKTIHTERVTKMPWPGEALLSRFVLNKPQRWSPSTPLLYQCRV
TVTTSAGEYTAHETFGVRHTEWVDHGPFKLNGERLLLRGTHRHEDHAGYAAAMPDDLIEQ
EMTLIKEMGVNFIRLAHYQQSRRVVELCDRLGILVWEEVPWCRAGIGGETFQEMGRRTLR
NMIAQHFNHPSILLWGLGNEDDWPTEYPEVNHEKIRAYLTELRDLSHQLDPSRITTIRRC
DFARDIPDVYSPSIWAGWYSGTYTEYQKSLETQRERVKHLFHAEWGADSHAGRHSESPDK
VLAEIATGHGTDERGLAYLNTGGEARVSRDGDWSETYACNLFDWHLKVQETLPWFTGSAQ
WVFKDFTTPLRVENPVPRVNQKGVVTRDMQKKESYYVFQSYWTDQPMAHIYGHSWPIRWG
AIGEKKMVKVYSNCETAELFVNGVSAGIRRRDSQNFPAAGLRWMVAFVDGANKLRVEASQ
GSTTISDEIEFLYETRSWGPPTTLKLAEVHRTDNNVTVEATLHDAKSILCLDARNRVRFT
IAGDGRLIDNLGTPTGSRVVELSNGRARIRIAHSRPGQAAVAVKADGISAALLQFS
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgttgactcgccgaaccttcatcaagagcagcgcacttgctgcatctgcatcgacactc
tctcgttccacgcttggcgcttcactggcgcatctggtcgacgacaccccggcaagcgaa
aagaaaaccatccggctctcttccggctgggagtttcttcgcgaacctttgggtggacta
tgggaggtctggcacagcaaagagattgcaacatggcaggcgatcgagatgccgcactgt
ttcaatgcctacgacggctgcgatcctgacgttcccgcttaccgcggcaatggatggtac
cgacttcatctgcctgtggccaatccgtatccgaacggtcgcacgctgcttcatttcgaa
ggcgcagggcaggcaacgaccgtctatgttggcaacactcccgtaggccaccacgtcggc
ggctacgacgagtttatcttcgatattaccgatgcggttgagcaacaccgttcgacatct
cattccaatggtcaacagaaggggcccgaagttcccattgctgtcctctgcgataactcc
agagaccttgatcgcatgccgtccgatctcagtgactttaccctctacggcgggctctac
cggcacgtcaatctcgtctatgtccccgccgtttccctggaacagctccacgtcaaggtt
gacctacctcgtgcagactcctcagcggaagtcaggatcgtcggcaccgtctataaccct
gctggcaacaccacgcccatcacccttgcgttggagatcgtctcttccgacggcaaaacc
atccacacagagcgcgtaacgaagatgccatggccgggagaggcgcttctctcgcgcttc
gttctcaacaaacctcagcgatggagcccctccactcccctgctctaccaatgtcgggtg
actgttacaacttccgctggcgagtacactgcgcacgagacctttggagtccgccacacg
gagtgggttgaccatggccccttcaagctgaatggtgagcggcttctgcttcgtggcacg
catcgtcatgaggatcacgccggctatgccgcagcgatgcccgatgatctgatcgagcag
gagatgacacttatcaaagagatgggcgtcaacttcatccgtctggctcactatcagcag
tctcgtcgcgtggtcgaactctgtgatcgactcggaattctagtctgggaagaggttccc
tggtgccgcgccggaatcggcggcgaaacttttcaggagatgggacgccgtaccctgcgg
aacatgatcgcccaacacttcaaccaccccagcatcctcctctggggcctgggaaatgag
gatgactggccgacggaataccccgaggttaatcacgaaaagattcgcgcttatctcacc
gagcttcgcgatctctcacaccagctggatccatcacgcataactaccatccggcggtgt
gactttgcccgcgacatccccgacgtctactccccttccatctgggcaggctggtacagc
ggaacctacaccgaatatcagaaatctctggagacacagcgcgaacgcgtcaaacatctg
tttcatgccgaatggggagccgacagccacgccggacggcactccgagagtcctgacaag
gtgctggcagagatcgccaccggccacggcaccgatgagcgagggcttgcatacctcaat
accggcggcgaggcccgtgtctcccgtgatggcgactggtctgaaacctacgcctgcaat
ctcttcgactggcacctcaaggtgcaagagacgctgccctggtttacaggctcggctcag
tgggtcttcaaggacttcactactccgctgcgggttgaaaacccggtccctcgcgtcaac
cagaagggcgtcgtaacccgcgacatgcagaaaaaggagtcctattacgtcttccagtcc
tattggaccgaccagcccatggcacacatctacggccactcatggcccatccgctggggc
gccataggtgagaagaagatggtcaaggtctattccaactgcgagacggctgagctcttc
gtcaatggcgtctctgccggtatccgaaggcgcgacagccagaacttccctgccgccggg
ctccgctggatggtcgcttttgttgatggagcaaacaaactccgggtcgaagccagccag
ggttccaccaccatctccgatgagatcgagttcctttacgagaccagaagctggggtcca
cccacgactctgaagctcgcagaggtccatcgcaccgataacaacgtcacggtcgaggcc
acgctccatgacgccaaaagcattctctgcctcgatgcgcgcaatcgcgtgcgcttcacg
atcgccggcgatggcaggctgatcgacaatcttggcactcccacagggtcgcgtgtcgtg
gagctttcgaatggccgcgcccggatcagaatcgcacacagtcggccggggcaagctgca
gttgcggtcaaagctgatggaatctccgccgctctcctccagttctcataa
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