Edaphobacter sp. 12200R-103: GWR55_05965
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Entry
GWR55_05965 CDS
T06408
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda00020
Citrate cycle (TCA cycle)
eda00190
Oxidative phosphorylation
eda00650
Butanoate metabolism
eda00720
Other carbon fixation pathways
eda01100
Metabolic pathways
eda01110
Biosynthesis of secondary metabolites
eda01120
Microbial metabolism in diverse environments
eda01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GWR55_05965 (sdhA)
00650 Butanoate metabolism
GWR55_05965 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
GWR55_05965 (sdhA)
00720 Other carbon fixation pathways
GWR55_05965 (sdhA)
Enzymes [BR:
eda01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GWR55_05965 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
GIDA
DAO
HI0933_like
NAD_binding_8
AlaDh_PNT_C
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
QHS51336
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Position
1416074..1417849
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AA seq
591 aa
AA seq
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MAAATPRIVVVGGGLAGLSAVIKIAEAGGKVDLFSIVPVKRSHSVCAQGGINSAKNLKGE
GDSPWAHFDDTIYGGDFLANQTPVKQMCEQGPGIIDLLDRMGVPFNRTPEGLLDFRRFGG
TLFNRTAFAGATTGQQLLYALDEQVRRYESEGKVTKYEGWEFLSSVLDSKGICRGICAMD
LRTMELRTFPADAIIICTGGNGAIFGKSTNSVVCTGSAQSALYQQGAYYANGEFIQVHPT
AIPGEDKLRLMSESARGEGGRVWVPKDKNDKRASQSIPESDRWYFLEEWYPKYGNLVPRD
VATRAIFKVVYEHGMGIDGQPMVYLDVSHLSPERQHKLEGILEIYEKFVGDDPRKVPMKI
FPGMHYTMGGLWVDFNQQTNIPGVFAAGEADYSIHGANRLGANSLLSCIYGGFVAGPQAM
QYAKSLTAIEGDGGHAAELQRQKEYNDVLLKNPGTENPFKIWRELGETMTKHATIIRYNA
GLDEADAKIVELQQRYRNINLSDKSQWANTSFAFARQLYNMLELARVIVQGARLRDESRG
AHYKPDFPERNDERFLKTTKASFVSGAPKFEYEDIDIQFIPPRPRRYDATA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcaaccccgagaattgtagttgtaggcggcggactcgccggcctctccgcc
gtcatcaagatcgccgaagcgggaggcaaggttgacctcttctccatcgtgccggtgaag
cgctcgcattcggtctgcgcacagggcggcatcaactcagccaagaacctgaagggcgaa
ggcgacagcccctgggctcactttgacgacaccatctatggcggcgactttctggccaac
cagacgccggtcaagcagatgtgcgagcagggtcctggaatcatcgacctgctcgaccgc
atgggcgtgcccttcaaccggacacccgaggggctgttggactttcgccggttcggcgga
acgttgttcaatcggacagcctttgccggagccacgaccgggcagcagctgctctacgca
ctcgacgaacaggtacgccgctacgagtccgaaggcaaggtcacgaagtacgaggggtgg
gagttcctgtcctccgtactcgattccaagggcatctgccgcggcatctgcgcgatggac
ctgcgcacgatggagctgcgcaccttcccggcggacgccatcatcatctgcactggcggc
aacggagccatcttcggaaagtcgacgaactccgtcgtctgcaccggatcggctcagtcg
gccctgtatcagcagggcgcctactatgcgaatggcgagttcatccaggtgcatccgacg
gcgattccgggcgaggacaagctgcgcctgatgtcggagtcggcccgcggtgagggcggc
cgcgtctgggtccccaaggacaagaacgacaagcgcgcctcgcagtcgattccggagtcg
gatcgctggtacttcctcgaagagtggtatccgaagtacggcaacctggttccacgcgac
gtcgctacccgcgccatcttcaaggtggtctacgagcacggcatgggaatcgacggacag
ccgatggtatatctggatgtctcccacctgtctccggagcggcagcacaagctcgaggga
atcctcgagatctacgagaagtttgtgggcgacgatccccgcaaggttcccatgaagatc
ttccccggcatgcactacaccatgggcggcctgtgggtggatttcaaccagcagaccaat
atccccggagtcttcgcggcgggtgaggcagactactcgatccacggagcaaatcgtctc
ggtgcgaactccctgctctcctgcatctacggtggatttgtggccgggccgcaggcgatg
cagtatgcaaagtcattgacggcgatcgagggcgacggcggtcacgcggccgagttgcag
cgccagaaggaatacaacgacgttctgctgaagaatccgggtaccgagaaccccttcaag
atctggcgcgagcttggtgagacgatgaccaagcacgccaccatcatccggtataacgcc
ggtctggatgaggcggacgccaagatcgttgagctgcagcagcgttaccggaacatcaat
ctctccgataagagccagtgggcgaacacgagctttgcctttgcccggcagctctataac
atgctggagttggcgagggtaatcgtgcagggtgctcggcttcgggacgagtcccgagga
gcgcactacaagccggacttcccggagcgcaacgacgaaaggttcctgaagacgaccaag
gcgagctttgtgagcggcgcgccgaagttcgagtacgaggacatcgatattcagttcatc
ccacccaggccgcggcgctacgacgccactgcctag
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