Edaphobacter sp. 12200R-103: GWR55_06120
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Entry
GWR55_06120 CDS
T06408
Name
(GenBank) tetratricopeptide repeat protein
Organism
eda
Edaphobacter sp. 12200R-103
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP_3
TPR_2
TPR_1
TPR_11
TPR_8
TPR_17
TPR_16
TPR_12
TPR_19
TPR_14
TPR_9
TPR_7
FG-GAP
TPR_10
TPR_CcmH_CycH
AhpC-TSA
UnbV_ASPIC
Redoxin
ARM_TT21_N
TPR_6
ARM_TT21_5th
ANAPC3
TPR_Slam
TPR_MalT
ARM_TT21_C
ARM_TT21_2nd
TPR_NPHP3
TPR-S
TPR_15
HEAT_Nup120
Thioredoxin_8
T7SS_EccA1_N
DUF5112
Motif
Other DBs
NCBI-ProteinID:
QHS53704
UniProt:
A0A6B9YWE2
LinkDB
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Position
1458219..1461965
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AA seq
1248 aa
AA seq
DB search
MAPLGSSLLTQNLWSSVGQPTLGLEEFYLKPNYPTKSPLEDVLRLVPPGTDEFITEKYAF
QIEQELKQWSVSLIRSGRDLSSLAGLLDNSISATALTPMQQTTIRNAQGIEALKIEFGSE
TTSGRDEFLRELRDYFQPATRILTAQFDVVSLEDISGGPQDLQVGIRYNFVFEIEGARRE
ERVGQWQTKWIFTSPNTWRLHHLVASGEVRCIVSSPAFVDVTEHAFGSIDSYRSQLLHGT
DYWRTVLDGACGIDVYGNNGIAAGDFDNDGFDDLYICQPGGLPNRLYRNRGDGTFEDVTE
HAGVGVLDNTSCAIFADFRNSGLQDLLVVCGTGPLLFLNQGNSKFHMKRDAFTFAQDPQG
TFTHAAVADYDQDGKLDIYFCLYSYYLGLDQYHYPVPYFDARNGPPNFLLHNEGDGKFTD
RTGVAGLNKNNNRYSFACAWQNSKTNGFPDIYVANDFGRSNLYRNNGDGTFTDVSTEAHV
EDAGAGMSASWSDIDNDGQPDVYAANMWSAAGQRIAEQALFHKNAPENIRALYRHHARGN
SLYRNLGNGTFQNVSNQIGVEMGRWSWSSDFWDFDHNGYSDLYVTNGYISGSEHNDLASF
FWRQVVGKSPEDSTPSQAYEHGWNALNELIRSDNSWSGYERNVMFANNGDGTFTELSGAV
GLDFIEDSRSFALADIDHDGRLEVILKNRNAPQLRVVHNALQHIGHSVSFRLHGTKSNRD
AIGSIIVLEAGPLKQTKSLQAGSGFLAQHSKEIFFGIGRPADPVRATIHWPSGNKQIFEN
IPVDHRIEIQEDLDSYVAKPFTASSATSSHSVPQSLVDHPPAAFGTWLIEPLKAPGFSLP
GLDGKVYSLHSSLGGFTLLNFWTARAPQCRSMLTHFHQHQSEFNRANLKLLAINTDEDAS
AGKLLATQLGLDFPILFASTEISGIYNIIFRYLYDRRRDLVLPGSFLVNAEGMILKVYQG
QADIQQILKDINLASDSTSERLLRALPFPGAVIQDDFRRNDFTYGVALFQHGYLDAAAES
FQQVILQKPNDSEAYYNLGTLSLHRNDLPTARRYLEQTLKLRPDYPEAWNNLGMIAAQQG
LADEAIRNFQQSLGLRPNYTIALLNLGNLYRHQGAFDKAMNLFRQALQLKPDDAEANYSL
GMLYAQQNQLQQASDSLQKAATLRPGYPEALNNLGVIYVRTGDYEHAEEQFKTCIRLTPS
FGQSYLNLAQLYAIRHEKQQAIQILQQLLVLQPQNQTAQQALKMLSGP
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggctccccttggtagctcgcttttgacccagaatctctggtcatcggtaggccagccg
accttaggcttagaggagttttatctcaaaccaaactacccgacaaaatcccccctcgaa
gacgtcctacgtctcgtaccgccaggaactgacgaatttatcacggaaaaatacgccttc
cagattgagcaggagctgaagcagtggagtgtctcgctcattcgttcgggtcgtgatctc
agttcgcttgcaggactacttgataattccatttcagccacagcactcacacccatgcag
caaacaacaatacgaaatgcgcaagggattgaggctctcaagatagaattcgggtcggag
acgacctcagggcgcgatgagtttttaagagaacttcgcgactattttcagcctgcgact
cgcatcctgactgctcaattcgatgtagtcagtctcgaagatatctccggaggaccgcag
gaccttcaagttggtattcgatacaactttgtgttcgagatcgaaggcgcacgtcgcgaa
gagcgcgtcgggcaatggcaaaccaaatggatttttacttccccgaatacctggagactt
caccacttggtggcgagcggagaggtgcgctgcatcgtatcttcgcctgcttttgtcgat
gttacagaacatgcatttgggtccatcgactcgtaccgctcccaattactgcacggcact
gattattggcgaactgttcttgatggtgcatgcgggatagatgtttacgggaacaacggt
atcgccgccggcgattttgataacgatggatttgacgatctttacatctgtcaaccggga
ggcctcccgaaccgcctttatcgcaatcgcggcgatggaacatttgaagatgtcaccgaa
catgcgggcgtaggggtgctcgataacacctcatgtgcaatcttcgcggactttcgtaac
agtggtctgcaggacttgcttgtcgtttgtggcaccggaccattgctcttcctgaaccaa
ggcaatagcaaattccatatgaagcgcgatgccttcacttttgcacaagatccgcaggga
actttcacccatgctgcagtggccgattacgatcaggatggaaagctggatatctatttc
tgcctttacagctactatctcgggctcgaccaatatcactatcctgtgccctacttcgat
gcacggaacggccctcccaacttccttttgcacaacgaaggcgatggcaaattcacagat
cgtacaggagttgccggactcaacaaaaacaacaaccgttatagcttcgcatgcgcatgg
cagaattccaaaacaaatggttttccagatatctatgtggcaaacgatttcggccggagt
aatctttatcgaaacaatggcgacggcactttcacggatgtctcaaccgaggcccatgta
gaagatgctggagcaggcatgagcgcctcctggtccgatatcgataatgatggtcagcct
gatgtgtatgcggccaatatgtggtcggcagcaggccagaggatcgccgaacaagcactt
tttcacaagaacgcaccggaaaatattcgcgcgctctatcgccatcatgctcgcggcaac
tccctttatcgcaatttggggaatggcacatttcaaaatgtaagtaatcagataggcgtc
gagatggggcggtggtcgtggagttcggatttctgggacttcgatcacaacggttattca
gacctctacgtcacgaatggctatatctctggttccgagcataatgaccttgccagcttc
ttctggcgacaggtcgtcggaaaatcccctgaggattcgactccatctcaagcatatgag
catggatggaatgcccttaacgagctcatccgttccgataactcctggagtggttatgaa
agaaatgtgatgttcgcgaacaacggagatggaacatttacagaactctcgggagccgtg
ggcctcgactttatagaagacagccgctcgtttgcccttgccgacatcgaccatgatggc
cgcctggaagtgattctgaagaatcgtaatgctcctcagctccgcgtcgtgcacaatgcg
ctgcaacatatcggccactcagtctctttccgtttgcatggcaccaaaagcaaccgcgat
gcaatcggctctataattgtgttagaagcaggccccttgaagcagacaaaatcgcttcag
gctggttccggcttcctcgcgcaacattcgaaggagatcttcttcggcataggacgcccc
gccgatcccgttcgtgcaacgattcactggccttcaggaaataagcagatttttgagaat
atccctgtcgaccatcgcatcgagatccaggaagatttagattcgtacgtcgccaagccc
ttcaccgcatcttcggcaacctcttctcattctgtccctcaatctctcgtcgatcatcca
cctgccgcgttcggaacctggctcattgagccgttgaaagcacccggattttcccttccg
gggcttgatggcaaagtgtacagtctgcattcatccctcggcggctttacgcttctcaac
ttttggacagcccgcgcgccgcagtgtcgcagcatgctgacacattttcaccagcatcaa
tcagaattcaaccgcgccaatttgaagctcctggccatcaatacggatgaggacgcttca
gcgggaaagctactggcaacgcaacttggcctagattttcccatcttatttgcgagcact
gaaatttcgggaatttacaacatcatctttcgttacctatacgatcggcgtcgcgatttg
gtgcttccaggatcattcctggtaaatgcagagggaatgattcttaaggtttatcagggg
caggctgacatccagcaaatcctcaaagacatcaatttagcatctgattcaacctcagaa
cgattgctgcgagctcttcccttcccaggcgcagtcatccaagatgactttcggcgcaac
gatttcacctatggcgtcgctctcttccagcatggatatcttgatgctgccgcagaatcc
ttccaacaggtcatccttcagaaacctaatgactcggaggcctactacaatctcggcacg
ttaagtcttcatcgcaatgatctccccacagcgcgccgatatctcgagcagacgctcaag
ctccgtccagactaccctgaggcatggaacaacctcggcatgatcgcagcccagcaaggc
ctggcggatgaagcaatccgcaatttccaacagtccctcggccttcgccccaattacacc
attgcccttctcaatctaggcaatctttatcgtcaccaaggcgcattcgacaaggccatg
aacctgttccgccaagcactccagcttaaaccggacgatgcagaggccaactacagtctc
ggcatgctttacgcacaacagaatcaattacagcaggcatccgattctcttcaaaaggcg
gccacactgcgtccaggctaccctgaagcgttgaacaacctcggcgtgatctatgttcgc
actggcgactacgaacatgcagaagagcagttcaagacctgcatccgccttacaccttcc
ttcggtcagtcttatctgaacctcgcccaactctacgccattcgccacgagaagcagcag
gcaatccagatcctgcagcagctattggtattgcagccacagaaccaaacagcacaacag
gcgctaaagatgctctcaggcccttga
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