Edaphobacter sp. 12200R-103: GWR55_06670
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Entry
GWR55_06670 CDS
T06408
Name
(GenBank) KpsF/GutQ family sugar-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda00541
Biosynthesis of various nucleotide sugars
eda01100
Metabolic pathways
eda01250
Biosynthesis of nucleotide sugars
Module
eda_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GWR55_06670
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
eda01005
]
GWR55_06670
Enzymes [BR:
eda01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
GWR55_06670
Lipopolysaccharide biosynthesis proteins [BR:
eda01005
]
Lipid A
GWR55_06670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF3659
Motif
Other DBs
NCBI-ProteinID:
QHS51461
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All DBs
Position
1615896..1616900
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AA seq
334 aa
AA seq
DB search
MSDTPLTSQNHTLPSEYVRIEARALLELAMRLDGPMQAAFAQAVDQVLAAITGRNRVILT
GIGKSGIIARKIVATLCSTGTPAHYLHPAEAVHGDLGMLAHGDTVLLLSASGETEELLRL
LPLLKRMTGKLIAFCGNPSSTLAQASDVILDASVSCEACPNNLAPTASTTVMLALGDALA
LEVSRRRGWKAEDFAELHPGGRLGKRLAKVGELMHAGDALPRVLSLTPMSEVIYEMSRKK
LGMTTVVGKDGVLLGMISDGDLRRLLERDGGKALDHNAGEIMNPDPITIEPGAFASSALA
LMEEKKITSLIVTTSNGRAEGVLHLHDLWTLELI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacactccgcttacctcccagaatcacaccttaccttcggagtatgtccgcatc
gaggcaagagctctgcttgagctggcgatgcgcctggacggccctatgcaggcggccttt
gctcaggccgtagaccaggtcctcgcagccattaccggccgcaatcgagtgatcctgacc
gggatcggcaagagcggcatcatcgcacgcaagattgtggcgacactgtgctccacaggt
acaccggcgcattacctgcaccccgccgaggccgtacacggagatcttgggatgctggca
catggagataccgtcctgctgctctccgccagcggggagacggaggaactgctgcgcctg
ctccccctgttgaagcggatgacgggtaaactgatcgctttctgcggcaatccgtcttcg
acgctggcgcaggcaagcgatgtgattctggacgccagcgtatcgtgtgaggcctgcccg
aacaatctggccccgaccgcctcaacgacggtaatgctcgcgctaggggatgcgctcgca
ctcgaggtgagccgcaggcgcggctggaaagccgaagactttgccgaactgcaccccgga
ggacgcctcggcaaacggctggcaaaggtgggtgagttgatgcatgcgggcgatgccctc
ccgagggttttgtccctcactcccatgtccgaagtgatctacgaaatgtctcgcaagaag
ctgggaatgaccacggtggtcggcaaagacggggtgctgcttggcatgatctcggacggc
gatctgagaaggcttctggagcgcgatggaggcaaggcgctggatcacaacgcgggcgag
atcatgaacccagatccgataacaatcgagccgggcgcatttgcctcttcggccctggcc
ctgatggaagagaagaagataacctcgctgatcgtgactacttcgaatggacgtgcagag
ggcgtcctgcacctgcacgatctctggacgcttgagctgatatga
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