Edaphobacter sp. 12200R-103: GWR55_06680
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Entry
GWR55_06680 CDS
T06408
Name
(GenBank) penicillin-binding protein
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda00550
Peptidoglycan biosynthesis
eda01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GWR55_06680
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
eda01003
]
GWR55_06680
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eda01011
]
GWR55_06680
Enzymes [BR:
eda01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
GWR55_06680
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GWR55_06680
Glycosyltransferases [BR:
eda01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
GWR55_06680
Peptidoglycan biosynthesis and degradation proteins [BR:
eda01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
GWR55_06680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Beta-lactamase2
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
QHS51463
UniProt:
A0A6B9YR17
LinkDB
All DBs
Position
1618815..1621436
Genome browser
AA seq
873 aa
AA seq
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MPVKLKYGSNKSNSRQSSIVEKLHLDNRFVRYGLVLVLGCFLVALTVLGYYYFKYENIVN
DRLAKGPLFANVSQIYATPREVRDGQKLSTSEIAAELRKAGYNSNPQLGTFQLNGDSIFI
KPGPESYHTTDGATISAPNGIVQKITGENGAALSAYELEPQLITALSEDSRRTKRLLVSY
QDIPPRMVQAVTAIEDRNFFEHNGINFLRIVKCGVEDLMSGRKRCGGSTLTMQLARGFFL
SPEKHLKRKMIEILITFQLESRFSKQQIFEMYANQMNLGYIGSYDINGFGEASRAFFGKN
LGQLDTAECAMLAGLLQNPSYRNPYRHPQRAIARRNVVLDSMVETGAITASEATRAKAEP
LHLAPPNIEARQAPYFVDLVHEQLVKRISDQDLAHQSLRIYTSLDPDLQRAASEAVEVGM
KNVDELVRKRYARRKDSGPITYPQVALVALNPHTGQILALVGGRNYSASQLNHAIAQRPT
GSIFKPFVFASAFNTSLNGTNLDDNGPFTAVSKINDDPQDFGDNGKPYIPGNFVKGEYPG
MVTAADALAHSLNIATIALAQKVGYGNVAALARSAGIVNARPTPSMAIGTYNATPIDMAG
AYTIFANGGVHINPWMLASVRNTNGDIVSDFSSVAKQIIDPRVAFLTQSLMEGVMNFGTG
AAVRARGFSAPAAGKTGTEHDAWFAGYTSTLLCVVWVGNDDYTDIKVQGADAAAPIWAEF
MKRAIKLPQYSDVKPFAPPDGITIVKVDRDSGLLADPTCSVHTMNAAFLDGTAPTGSCSQ
MHDNPQNFFQKLFGVGGHNETVSPYTPAPATSPANTAVPLPAHPSAAKPANSASSAEQTA
KPEEPKKKRNFFQKLFGGGGDKDKKDKGQEPPR
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
ttgccagtcaaactcaaatacggcagcaataaatcgaactccaggcagtcgagcatcgtc
gagaaactccatctggacaatcgcttcgtgcgatacggcctggtgcttgtgctcggctgt
tttctggtggctctcaccgtcctcggctactactactttaagtacgaaaatatagtgaac
gaccgcttagccaagggaccgctgttcgccaacgtgtcgcagatctatgcaacgccacgc
gaggtgcgcgatggccagaagctgtcgacctcggagattgcagcagaacttcgcaaagcc
ggctacaacagcaatccgcagctgggaacgtttcagctgaacggcgacagcatcttcatc
aagccgggccccgagagctatcacaccaccgatggagcgacgatcagcgctccgaacggc
atcgtgcagaagattacgggggagaatggagcggcgctgagcgcttatgagctggagcct
caattgatcacagcgctctcagaggatagccgtcgcacaaagcggctgttggtcagttat
caggatattccgccgcgcatggtacaggctgtaacggcaattgaagaccgcaacttcttt
gaacataacggaattaactttctgcgcatcgttaaatgcggcgtagaagatctgatgagc
ggccggaaacggtgcggcggctctacgctgaccatgcaactggcgcgcggtttcttcctg
tccccggagaaacacctgaagcggaagatgatcgagatcctgatcacctttcagctggag
tcgcgcttttcaaagcagcagatcttcgagatgtacgccaaccagatgaatctgggatat
atcggcagctacgatatcaatgggtttggcgaagcttcccgggctttttttggcaagaac
ctggggcagctcgatacggcagagtgcgccatgcttgcgggtcttctgcagaatcccagt
tatcgcaacccctaccgccacccgcaacgcgctatcgcgcgacgcaacgtggtgcttgat
tcgatggtggagaccggggcgatcacggcctcggaggccacacgggccaaggccgagccc
ctgcaccttgctccgccaaatatcgaggcaaggcaggcaccttatttcgtcgatctggtg
catgagcagttggtgaagcgtatcagcgatcaggatctcgctcaccagagtctccgaatt
tacacgtcgcttgatccggacctgcaaagggccgcctcagaggccgtcgaggttggcatg
aagaatgtcgacgagctcgtacgcaagcggtacgcccgcagaaaagactcgggcccgatc
acctatccgcaggttgccctggtggctctgaacccacacacgggccagattctggctttg
gtgggtggccgcaattactccgcctcacagttgaatcacgcaatcgcccagcggcctacg
ggatcgatcttcaagccgttcgtctttgcctcggcattcaacacttcgctcaacggcacc
aaccttgatgacaatggcccattcaccgcggtcagcaagatcaatgacgacccacaggac
ttcggggacaacggcaaaccgtatattccaggcaatttcgtaaaaggtgagtatccgggc
atggtgacggctgccgatgccctggcgcactctctcaacatcgcaaccattgcgctcgct
cagaaggtcggctacggcaatgtggctgcacttgcccgctccgccggaatcgtcaatgca
cgtccgactccgtcgatggcaatcgggacctataacgctacgccgatcgatatggcggga
gcgtacacaatcttcgccaacggtggcgtccacattaatccatggatgctggcctcggta
cgcaataccaatggcgatatcgtgtcggatttctcctccgtcgccaagcagatcatcgat
ccgcgggtagcgttcctgacgcagtcgctgatggaaggcgtaatgaactttggaaccggc
gcggcagtgcgcgctcgcggatttagcgcaccggcagcgggcaagaccggaaccgagcat
gatgcgtggttcgccgggtatacctctaccctgctctgcgttgtctgggtaggcaacgac
gactacaccgatatcaaggttcagggagccgacgccgccgctccgatctgggcggagttc
atgaagcgggcgatcaagctgccgcagtactccgacgtaaagccgttcgctcctccggat
ggaattacgatcgtgaaggtcgatcgcgattcgggactgctggctgatccgacctgcagt
gtgcacactatgaatgcggcgttcctggatggcactgctcctacgggcagctgctcgcag
atgcacgacaatccgcagaacttcttccagaagctcttcggggtgggagggcacaacgaa
acggtctcgccctatacacctgctcctgcgacatcgcccgcaaataccgctgtccctctt
cctgcacatccttccgctgcgaagcccgctaacagcgcttcgtccgcggagcagaccgca
aaacccgaagagccgaagaagaagagaaacttttttcagaagctctttggaggcggaggc
gataaggataagaaggacaaaggtcaggagcctcctcggtaa
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