Edaphobacter sp. 12200R-103: GWR55_06915
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Entry
GWR55_06915 CDS
T06408
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
eda
Edaphobacter sp. 12200R-103
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
HTH_50
AAA_2
AAA_22
AAA_3
bpMoxR
MCM
AAA_7
AAA_30
PGM_PMM_II
HTH_Tnp_ISL3
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QHS51505
UniProt:
A0A6B9YQI3
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All DBs
Position
complement(1675021..1676466)
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AA seq
481 aa
AA seq
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MERVLIVEDEIHARTGLTELIESWGYRTEGAADGVEGLEKALSWKPAIVVTDLKMPRMDG
MELLNRIGELPDHIAVVMMTAQGSIESAVEAMRRGAFDYVPKPVDPLRLRTILQNASRQH
AETETARVGYSQRLRPDTGTLGPLVGTSERMKQVFSLIERIAPSNVSVLVTGESGTGKEL
VARALHELSSRHNKPFVAVNCAAIPETLIESEIFGHEKGAFTGALERRAGCFELAEEGTL
LLDEIGEMPAATQAKLLRVLEDRKLRRLGSKTETPVDVRVVAATNKDPEQAVAAGELRGD
LYYRLNVFNIQMPPLREHLEDIAPIAQKMIGDMNERHNCSVTGMKDSLLKKLMSYQWPGN
VRELRNTIERATIMAGTGMLGLEHLPPQFGESGFSPVIGRPGRSSESDGARPSEVERYLE
DQNTVRVEVGTTVDEAERQLILKTLMSTHNNKTKAAEILGISSKTLQNKLKEYSNNSALV
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgagttttgatcgtcgaagacgagatccatgcgcgcacgggtttgaccgaactg
atcgagagctgggggtacaggactgaaggcgcagcggatggcgttgaaggtctggagaag
gcgctctcctggaaaccggccatcgttgtgaccgacctgaagatgcctcgcatggacggg
atggagctgctgaatcgcattggggagctgcccgaccacatcgcggtcgtcatgatgacg
gctcagggatccatcgaatctgcggtggaggcaatgcgcaggggcgccttcgactacgtc
cccaagccggtcgatccgcttcgtttgcggaccattttgcagaacgccagccggcagcac
gccgagactgagaccgctcgcgtgggctactcgcaacgcctgcggccggataccggcacg
ctcgggccgttggtaggaacctcagagcggatgaagcaggtcttctcgctgatcgagcgg
attgctccctccaacgtcagcgttcttgtcaccggcgagagcggaaccgggaaggagttg
gtggcccgtgccctgcacgaactcagctcgcggcacaacaagccatttgtggcagtgaac
tgcgcggccattcctgagacgttgattgaaagcgagatcttcggacatgaaaagggagcc
tttacgggtgcactggaacggcgggcgggatgctttgagctggcggaagaggggacgctg
ctgctggacgagatcggtgagatgccggcggcgacacaggccaagctgctccgagtactt
gaggaccgtaagctgcggcgactgggaagcaagaccgagacgccggtcgatgttcgcgtt
gtagccgccaccaacaaggatcccgagcaggctgttgccgcaggcgagttgcgtggcgac
ctgtactaccggctgaatgtcttcaatatccagatgccgcccctgcgcgagcacctggaa
gacattgctccgattgcgcagaagatgatcggggacatgaacgagcgccacaactgcagc
gtgacgggaatgaaggacagccttctcaagaagctgatgtcctaccagtggccgggcaat
gtgcgtgaactgcgcaacacaatcgagcgtgccaccattatggccggaacgggcatgctg
ggtttggagcaccttccgccgcagtttggggagtcgggcttttctcccgtcatcggcagg
ccggggcgttccagcgagtcggatggcgcccgtccgagcgaggtggagcgctacctcgaa
gatcagaacacggtccgcgttgaagttggcaccaccgtcgatgaggcggagcggcagctg
atcctcaagaccctgatgtcgacccacaacaacaagacaaaggccgcagagattctgggt
atcagttcgaagaccttgcagaataagctgaaggaatactcaaataactctgccctggtg
gactag
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