Edaphobacter sp. 12200R-103: GWR55_07490
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Entry
GWR55_07490 CDS
T06408
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
eda
Edaphobacter sp. 12200R-103
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eda03036
]
GWR55_07490 (smc)
Chromosome and associated proteins [BR:
eda03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
GWR55_07490 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
AAA_23
ABC_tran
COG6_N
ATG16
Motif
Other DBs
NCBI-ProteinID:
QHS53730
UniProt:
A0A6B9YVL5
LinkDB
All DBs
Position
1799686..1803564
Genome browser
AA seq
1292 aa
AA seq
DB search
MLKLKKVQILGFKSFCDRTEVQLSGEGIAAIVGPNGCGKSNISDAITWVLGEQSAKSLRG
IKMEDVIFAGTRDRKPTGMAEVSLTLVDPEVYDGATLSPDAPEVVVTDVHPEDPAAEVSD
WDEAAMRQQHAQETEDAVAEAQPGTVIEGEAAEAAHEGTESAGNVVLKIRRRKFNRAPVR
AGELTITRRLFRSGESEYLLNGKICRLRDIQDIFMGTGLGGESYAIIGQERIGQLLSSKP
LDRRSIIEEAAGITRFKTKKRLAELRLESAKQNLARVNDIFEEVTRQMGTLKRQAAKAER
YGALRDELRTRLRVVLASRMAQLDTEAADASEKIAALGAQIDQQAAALEQMDAEHSEGIS
RGYTLDQQIREAAGKANQSAVELERITARSASNADRIAELTQRLATGDEELAQAREQLQS
LAAELEEHRSFLANATHEASTSRQSVQQQQSEAQSAVRSLQGAEQQSEQNRRQTLQLVQR
ISQTRNEEAQAAAAFAGLEEEAHRLERESEIARQELETLGMQRGQVKLSFESVTERLKRL
ETEIAEMRQQIESHRREENESKRRGDQLRGELATLNGRKGSIEGLIRDHSYSTETVRNIF
KSNEAAASGKVAPVGTLADFLEVDGKYESVVDEFLRDELNFVVVKSWDAADAGMELLQTD
VEGRATFLVHPNAAQANFSFAQGMESEAPTNPAQIEGVVPLRDCVRVLDGFGRSLEVILP
KLREGYVAPDSYTARTLALSNPHAFFLSPTGETFHNVTVTGGRPRAQGPLALKRELAEVQ
HKIEQSQAALTQADLHTADLQRQMTELNATIDTKTLELREAEREAANSGAALRQMESEAA
RIERRLQEWTLAIERNRDAQQQKQDLVERKQQEAERLEAERAGLESTLAALQAQLDELRG
RREQLQQSAAEASAALAGLEERRRNAQANFDQTQRLHNSQNQRIQQLEQQLAAANTEKLR
REEETESLAAQQSELAEIRQNALADGEQLTTQANELRVAMAELDQRLRSLRHETESLREQ
RAAHTARAAKLASDIEHIDATCMNDLAVEASVLRGDETITRIEGDALHEEEEASRGLKQK
LEAMGPVNMMALDEYNETAQRHTFLETQRKDLLDSIENTQASIKEIDEISRQKFDEAFQV
INDNFSVTFSKLFGGGQAFMRLTDAENSAESGIDIVASPPGKKLQNILLLSGGEKALTAL
SLLVGIFQFQPAPFCILDEVDAPLDETNVGRFAKLIADMSATTQFVVITHSKRTMAQADV
IYGVTMQEPGVSKVVSVNLNRRDDNGTRRAVA
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
ttgctcaagctcaagaaggtccagattctcggcttcaaatcgttctgcgacagaacagag
gtccagctctccggtgaaggcatcgccgcgatcgtcggcccgaacggatgtggcaaatcg
aacatctccgatgctattacatgggtgctgggcgagcagtcggccaagagccttcgcggc
atcaagatggaagacgtcatctttgccggcacgcgcgaccgaaaaccaaccggcatggcc
gaggtatcgctcacgctggtcgatcccgaggtatacgacggggccacgctctctccggat
gctccggaggtggtcgtgaccgatgtccacccggaggatcctgcggcagaggtctccgac
tgggacgaagcagccatgaggcagcagcacgcccaggagacggaagatgccgtcgccgaa
gcgcaaccgggaacggtgatcgagggggaagctgcagaggcagcgcatgaaggtacagaa
agcgcgggcaatgtggtgctcaaaatccggcgacgcaaattcaaccgcgctcctgttcgt
gcaggcgagctgaccattacgcggcgcttgttccgctcgggcgaatccgaatatttgctc
aacggcaagatctgccggctgcgcgatattcaggacatcttcatgggaacaggactcgga
ggcgagtcctacgcgatcatcgggcaggagcgtatcggccagcttctcagctccaagcct
ctggaccggcgcagcatcatcgaggaggccgccgggatcacccgcttcaagacgaaaaaa
cgactggccgagcttcggttggagtcggcaaaacagaacctggcgcgcgtcaacgacatc
ttcgaagaggttacccgccagatgggcacgctgaagcgacaggcggccaaggctgagcgc
tatggcgctctgcgggacgagcttcgcacgcggctgcgcgtagttctggccagccggatg
gctcaactggataccgaggccgcagatgccagcgaaaagattgcggcgctgggcgctcaa
atcgatcagcaagccgccgccttggagcagatggacgccgaacacagcgaaggcatcagc
cgcggctacacgctcgatcagcagattcgcgaggcggcaggaaaggcaaaccagtccgcc
gtcgagctggagagaatcacggcacgatctgcatcgaatgccgaccgcattgcagagttg
acgcagcgacttgcaaccggcgacgaagaactggcgcaggcccgggaacaactgcagtcc
cttgcggctgagcttgaggagcatcgtagctttcttgcaaacgccacccacgaggcgagc
acctctcgccagtcggtgcagcaacagcagagcgaggcgcagagcgctgtgcgctcgctg
cagggcgcggaacagcagtcggagcagaaccgtcgccagacactgcaactggtgcaacgc
atctcgcagacgcgcaacgaggaggcccaggccgcagcagcattcgctggattggaagag
gaggcccaccgcctggagcgcgagagcgagattgcacgccaggagctggagacgctgggg
atgcagcggggacaggtaaagctctcctttgaatctgtgaccgagcgcctgaagcggctg
gagaccgagatcgccgagatgcgtcagcagatcgagtcgcaccgccgggaagagaacgaa
agcaagcggcgcggagatcaacttcgcggcgaactggctaccctgaacggacgaaagggc
tcaatcgaagggctgattcgcgatcacagctattcgaccgagacggtacggaacatcttc
aagtcgaacgaggctgcagcttccggcaaggtcgctccggtgggaacgctggcggacttt
cttgaagtggatggaaagtacgagagcgtcgtcgacgagtttctgcgcgacgagctgaac
tttgttgtcgtgaagagctgggatgctgcggatgcaggcatggagcttctgcagacagat
gtggagggccgcgcaaccttcctcgtccaccccaacgccgcgcaggccaatttctctttc
gcgcagggcatggagagcgaagctcctacaaaccctgcccagattgagggagtggtgccg
ttgcgcgactgcgtgcgggtactggacggctttgggcgatcccttgaggtgatcctaccc
aagttgcgcgaaggctacgtggcgccggactcctatacggcgcgcaccctggcattgtcg
aatccacacgccttcttcctctctcccactggcgagacgttccacaatgtcaccgtaacg
ggaggacgtccgcgggcccagggtcccctggcgctcaagcgtgagctagctgaggtacag
cacaagattgagcagtcgcaggccgctctgacgcaggcagacttgcatacagcagatcta
cagcggcagatgaccgagctgaacgccaccatcgatacaaagacgttggaactccgcgag
gccgagcgagaagcggcaaactctggtgcagcgcttcgccaaatggagtctgaagcagct
cgcatagagcgcagactgcaggaatggacgctggcgatagagcgcaatcgcgacgctcag
caacagaaacaggatctggtcgagcgcaagcagcaagaggccgagaggcttgaggcggag
cgtgcggggctggagagcacactcgccgcgctgcaggcgcagctggatgaactgcgcggc
cgtcgtgagcagctgcagcaatcggctgcggaggcctcagcagccctggccggcctggag
gagcgccgacgcaacgcgcaggcgaacttcgaccagacgcagcgccttcacaacagccag
aatcagcggattcagcagctggaacagcaactggcggcggcgaatactgaaaagctgcgc
cgcgaagaggagacggaaagtctcgctgcgcaacagtcggaactcgccgagatacgccag
aacgctcttgccgacggagaacagctgaccacacaggcaaatgagctgcgggtggccatg
gccgagctggatcagcggctgcgttcccttcgtcatgagaccgagtcgctacgggagcag
cgtgccgcccatacagctcgcgcagccaagctggcctcggacatcgagcacattgatgcc
acctgtatgaacgacctggctgtagaggcatctgtcctgcgtggtgatgaaacgatcacc
cgcatcgaaggcgatgccctgcacgaggaggaggaggcctcgcgcgggctgaagcagaag
ctcgaagccatgggtccggtcaacatgatggctcttgatgagtacaacgagacagcacag
cgtcatacctttcttgagacacagcggaaagaccttctggactccattgagaacacgcag
gcttccatcaaggagatcgatgagatctcgcgccagaagtttgacgaggccttccaggtc
atcaatgacaacttctcagtaaccttttcgaagctgtttggcggcggtcaggctttcatg
cggctgaccgatgccgagaactcagccgaaagcggaattgacattgtggcttcccctccg
gggaagaagctgcagaacatccttctgctttccggtggagagaaggcgctaacagcactc
tccttgctggtcggcattttccagttccagccggctcccttctgcatcctcgacgaggtg
gacgctccgctggacgagaccaacgtaggacgatttgccaagctgattgccgatatgagt
gcgacgacccagtttgtagtcatcacccatagcaaacgcacgatggcgcaggccgatgtg
atctatggcgtcaccatgcaagagcccggggtatccaaggtggtcagcgtcaacctgaac
cgccgcgacgacaacggcactcgacgtgcggtagcctga
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