Edaphobacter sp. 12200R-103: GWR55_09925
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Entry
GWR55_09925 CDS
T06408
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda00541
Biosynthesis of various nucleotide sugars
eda01100
Metabolic pathways
eda01250
Biosynthesis of nucleotide sugars
Module
eda_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GWR55_09925 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
eda01005
]
GWR55_09925 (kdsA)
Enzymes [BR:
eda01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
GWR55_09925 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
eda01005
]
Lipid A
GWR55_09925 (kdsA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QHS53785
UniProt:
A0A6B9YX12
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Position
2383094..2383918
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AA seq
274 aa
AA seq
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MNKPFDIGSLSVGKGKLFLIAGPCVIESESHSRRMADAIQRITSDLGMPYIFKASYDKAN
RTSIHSFRGPGVIEGTRILQTIAEATGLPVLTDVHTAQDCPRVAEAIDVLQIPAFLCRQT
DLLVAAAEAATSHNRAVNVKKGQFVAPADMRHAVEKIRESGCDRVCLTERGASFGYNNLV
VDMRSLPIMRSFAPVIFDGTHSVQTPSAANGVSGGQPEFIPVLARAAVAAGVDGIFLEVH
DDPPHAKSDGANALHLNHLREVLERLLAIHQAAS
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atcaataagcccttcgatatcggctccctctctgtcggcaaaggaaagctcttcctcatc
gccggcccttgcgtcatcgaatccgaaagccactcccgcaggatggccgatgcgattcag
cgcattacatccgatctcggcatgccttatatcttcaaggccagctatgacaaggcaaat
cgtacctcgatccacagcttccgaggccctggagttattgagggaacgcgcatcttgcaa
accatcgctgaggcaacggggcttcccgttctgaccgacgtccataccgcccaggactgc
ccgcgtgtcgccgaagccatcgatgtgctgcagattcccgcctttctttgccgccagacc
gatcttctcgtcgcagccgcagaagcggcgacctcccacaaccgcgctgtcaatgttaag
aaaggccagttcgtcgcgccggccgacatgcgccacgccgtcgaaaagattcgcgagagc
ggctgtgatcgcgtctgcctgaccgagcgcggagccagcttcggctacaacaatcttgtc
gtcgacatgcgctcactacccatcatgcgcagctttgcaccggtcatctttgacgggacc
cactccgtccagacgccgtcggcagccaatggcgtctccggaggccagccagagtttatc
ccggtgcttgcgcgtgccgccgtcgctgccggcgtggatggcatctttcttgaggttcac
gacgatccgccgcacgccaaatcagacggcgccaatgccctgcacctgaaccacctccgc
gaggtcctcgaacggcttctcgcaatccaccaggcggcatcctag
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