Edaphobacter sp. 12200R-103: GWR55_10500
Help
Entry
GWR55_10500 CDS
T06408
Name
(GenBank) HAMP domain-containing protein
KO
K13598
two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:
2.7.13.3
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GWR55_10500
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
eda01001
]
GWR55_10500
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
eda02022
]
GWR55_10500
Enzymes [BR:
eda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
GWR55_10500
Protein kinases [BR:
eda01001
]
Histidine kinases
NtrC family
GWR55_10500
Two-component system [BR:
eda02022
]
NtrC family
NtrY-NtrX (nitrogen regulation)
GWR55_10500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
HAMP
HisKA
HATPase_c_5
HAMP_PhoQ
PAS_4
PAS_8
PAS
WLS-like_TM
PAS_7
NtrY_N
HAMP_His_kinase_fung
HATPase_c_2
DUF6074
TPR_MLP1_2
Motif
Other DBs
NCBI-ProteinID:
QHS52116
LinkDB
All DBs
Position
complement(2532196..2534568)
Genome browser
AA seq
790 aa
AA seq
DB search
MNDSRRKVLSIALGTCLLVLFAALAALNAFNKRFLDPETTGQIFIYTGLSIVAFLLFVAV
LIMLVRNVLKLYADQRSNVMGTRLRTRMLWGAVLVSLLPISFMFAFSYLLLNRAVERWFS
QPVTEMRDASTNMAFELARYTTANARAEAESIATTLPDVTAAPLAAYSAEVQGVLRRHEI
TLQSGFVAVYRDQQLIASFQVPEGSAVVRVKPWAPESASDNSQKKGGEIVSSNGGISRNG
AIFATARRSDTPVFSVGDTDYALGTATARDSVMVVVGLPMPHGLADTMSTLRSAADTYWT
LFRSRRQLRNLYMLLLLMMTCLALFSSSWLALHLSKQVTKPVEALADAMAAIAAGDYARR
VQESATQELGELVRSFNLMAADLEGSRRAVEESTVQLSAANAALEARRGELETMLETIPN
GVAMLDSDRRILLTNRALSELIDPGGQRPFLGLAIKEVFPADLVELLDRLIRRSHRMGTA
SSEIELAAPHSEGLSGTLNLLITVALLETAAIKERPRREHRGYVLVIEDATELLHAQKQS
AWKEVARRVAHEIKNPLTPIGLSAEQIRRHIDRLSETLRFHQIESPSPQVIRRCSEVISG
SVESMRSLVDQFSALAEFPTAKPRPADLNTIVENSLAMFAGRMQTITVIQRMARGLPLVM
ADPEALKRALGNLIDNAAEAMQSSLLRELRISTGLLENGMVELTVADTGSGLTDEMRERL
FLPYFSTKERGTGLGLAIAAKIVQEHQGTIRAEKNVPAGAKFIIELRPAIGQDGESETAA
VVSGDGGVTA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatagcaggcggaaggtactgagcatcgcgctgggaacctgcctgcttgtgctg
tttgcggccctggcagctctcaatgcgttcaacaagcgcttcctcgatccggagacgacc
ggacagatcttcatctacacgggactgtccatcgtcgccttcctgctgtttgtcgcagtg
ttgatcatgctggtccgtaacgtgttgaagttatatgcggatcagcgcagcaatgtgatg
ggaaccaggctgcgcacccgcatgctatggggggcagtcctcgtcagcctgctgcccatc
tccttcatgttcgccttcagttatctgctgttgaatcgcgccgttgagcgctggttttcg
cagccagtgacggagatgcgtgacgccagcacgaacatggccttcgaactggcccggtac
accacagccaatgcgcgtgcagaggccgaatcgatcgcaaccacgcttcctgatgtgacc
gccgcgccactagcggcctacagcgctgaggtgcagggcgtgctgcgccgccatgagatt
acgctgcagagcggatttgtcgctgtctatcgcgatcagcagctgatcgcatctttccaa
gtcccggaaggcagtgccgtcgtgcgggtaaaaccctgggcgcctgagtccgcttcggat
aatagccagaagaaaggcggcgaaattgtctcctccaacggaggcatctcgcgaaacgga
gctatcttcgccactgcgcggcgcagcgacacgcccgtcttcagcgtgggcgatacagat
tatgccctcggcacggcgacggcgcgggatagcgtgatggtcgtggttgggctgcccatg
ccccatggtcttgcggacacaatgtcgacgcttcgttcagcggccgatacttactggacg
ctcttccgcagccggcgccagcttcgcaatctttacatgctcctgctgctgatgatgacg
tgcctcgcgctgttctcctccagctggctcgcgctgcatctttcaaaacaggtcaccaaa
ccggtagaggccctggccgatgcgatggccgccatcgctgccggcgattacgctcgccgc
gtccaggagagcgccacgcaggagcttggcgaactggttcgcagcttcaatctcatggcc
gccgatcttgaaggtagccgccgggcggtagaggaatctaccgtgcagttgagcgcggcc
aatgcagcgctggaggcccgtcgcggcgaactggaaaccatgctcgagacgatccccaac
ggggtcgcaatgctcgactccgatcgcaggatactgctgacaaatcgtgctctcagtgaa
ctgatcgatccgggaggacagaggccgtttctcggcctggctatcaaagaggtatttccc
gctgatctggtcgaacttcttgatcggctgattcgccgcagtcaccgcatgggcacggcg
tcaagcgagatcgagctggcggcgcctcactcggagggattgagcggcaccctcaatctt
ctgattaccgtggctctactggagacggccgccatcaaggaacggccaaggcgcgaacat
cgcggctacgtactggtgattgaagatgcgaccgaactgctgcatgcgcagaagcaatcg
gcatggaaagaggttgcgcgtcgcgtcgcccacgagatcaagaatccgctgactcccatc
ggcctgagcgcagaacaaattcgacgtcacatcgatcgcctctcagagacgctgcgcttc
caccagattgaatcgccgtcgccgcaggtcattcgccgctgcagcgaggtcatctccggc
tcggttgaaagtatgcggtcgctcgttgatcagttctctgcgctggcggagtttccaacc
gccaaaccccgccctgccgacctcaacaccatcgtcgaaaactcgctggcgatgtttgcc
ggacggatgcagacgattacagtgattcagcggatggcgaggggacttccgctggtgatg
gcagatcccgaggccctcaagcgtgcgctcggcaacctgatcgataacgccgccgaggcg
atgcagtccagcctgctgcgcgagctgcggatttcgaccggtctgctcgaaaacggcatg
gtcgagctgactgtcgccgatacaggctcagggctgaccgacgagatgcgcgaaaggctg
tttctcccatatttctccaccaaggagcggggcaccggcctcggccttgcgatcgcggca
aagatcgttcaggagcatcaggggaccatccgggccgaaaagaatgttcccgcaggagcg
aagttcatcattgagctgcgccctgccatcggccaggatggcgaatcggagacggcagcc
gtggtaagcggagatggaggtgttacggcgtga
DBGET
integrated database retrieval system
