Edaphobacter sp. 12200R-103: GWR55_10870
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Entry
GWR55_10870 CDS
T06408
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GWR55_10870 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eda03400
]
GWR55_10870 (xseA)
Enzymes [BR:
eda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GWR55_10870 (xseA)
DNA repair and recombination proteins [BR:
eda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GWR55_10870 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
WSD
Motif
Other DBs
NCBI-ProteinID:
QHS52180
LinkDB
All DBs
Position
complement(2615022..2616566)
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AA seq
514 aa
AA seq
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MSSDAEKPPTLASLRAGRSRLRTSAERTISAQTSLSFGTGEPVIEDLPASDPAPPAAASK
AAVPERRVWTVANLVGSIRQQIEASRSDLWVEGEISNCRPAPSGHIYFTLRDADAQLPVI
LFRRQAQMLRFRPADGLAVLVRGRVSVYESRGQLQLIAETLEPRGAGSLQLAFEQLKARL
LAEGLFDSARKRPLPPFPRCVGIITSPAGAVIRDIVTVVRRRHARLNLLVYPAVMQGASC
PGSVAAGLRFFHRNPGLIDLIVIARGGGSMEDLACFNDEALARIIAASELPVVSAIGHET
DFTIADFVADLRAPTPSAAAELITAAQHRVEDRVAALSNRASRAMRLHLLELRQRYARLS
SPMVLRRAHDSINRRGQRIDELQMRVERGSSRLLRLRAERLRILTERLHRQDISYRLAAS
RRRVERAAGILERAMVTAISLRKARMEADTARLRALSPLSILARGYALIYADNGTLLRSA
TETAPGESIHARLALGTISATVIAATDSTENSDS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatgcggaaaagccgcctacccttgccagccttcgggcaggcaggagcagg
ttgcgcacatctgccgaacgcacaatttctgcacagacaagcctgtccttcgggaccggc
gaaccagtaatcgaagacctcccagcctctgatcctgcgcctccggcggcagcttcaaag
gcggctgtgcctgagcgccgcgtctggactgtggcgaacctcgtcggcagtatccggcag
cagatcgaagccagccggagcgatctctgggtggagggagagatctcgaactgccgtccc
gctccctctgggcacatctacttcacgctgcgggatgccgacgcccagcttcctgtcatc
ctcttccgccggcaggcccagatgctgcgcttccgtcctgccgatgggcttgccgtactc
gttcgcggccgcgtctccgtctacgagtcccgcgggcaactgcagttgatcgcagagacg
ctggagccgcgcggcgccggatcgctccagcttgcttttgagcagctcaaggcgcggctg
ctggctgagggactcttcgacagcgctagaaagcgtccgcttccgcccttcccgcgctgc
gttggaattattacgtcgcctgccggagctgtcatccgagacatcgtgacggtggttcgc
cgccggcatgcgcggctgaatctgctggtctatccggcggtgatgcagggggcttcatgc
ccgggttccgttgcggccggacttcgcttcttccatcgcaatcccggtctgatcgatctc
atcgtgatcgcccgcggcggcggttcgatggaagacctcgcctgcttcaacgacgaggca
ctggcccgcatcattgctgcgtctgagcttcctgtcgtctccgcgatcggacacgagacc
gacttcaccatcgctgacttcgtcgccgatcttcgtgcacccactccctctgccgcagcg
gagctaatcacggctgcgcagcatcgcgtcgaagaccgagtcgccgcgctctccaatcga
gcttcccgcgccatgcgacttcatctgcttgagctgcgtcagcgctacgcccgcctgtcg
tcgccgatggtgcttcggcgcgcgcacgactccatcaatcgccgcggccagcgtattgac
gaactgcagatgcgggtggaacgtggctcgtcccggcttcttcgcctccgcgcagaacgg
ctccgcatcctcaccgaacgcctgcatcgccaggacatcagctaccggctcgcggcatcg
cggcgccgcgtagagcgcgcagcgggcatcctcgagcgcgcgatggtcacagcaatctcg
ctccgtaaggcacggatggaggccgacaccgcgcgtcttcgcgcgctctccccgctcagc
atcctcgctcgcggatacgctctcatttacgctgataatggaacgcttctgcggtctgcc
accgagactgcgccgggggagtccattcacgcgcgcctggccttgggaaccatctcggca
acagtgattgcagcaactgattcaacggagaatagtgactcatga
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