Edaphobacter sp. 12200R-103: GWR55_11810
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Entry
GWR55_11810 CDS
T06408
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
eda
Edaphobacter sp. 12200R-103
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eda01011
]
GWR55_11810
Enzymes [BR:
eda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GWR55_11810
Peptidoglycan biosynthesis and degradation proteins [BR:
eda01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GWR55_11810
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
DUF7204
HATPase_c_2
ELK
DUF6234
Motif
Other DBs
NCBI-ProteinID:
QHS53838
UniProt:
A0A6B9YVI1
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All DBs
Position
complement(2846183..2846959)
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AA seq
258 aa
AA seq
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MRCRQVLAGSVVTFALVLTGCHKKRVRAHHPPPPPPASSGSGRSSGHGSTSGSTARTAPA
PLPPAPPDVRGKPSLVETGIASWYGPPYAGRKGADGKVYDQNAMTAAHRTLPLGSIVRVT
NLSTNQSAVVKITDRGPFVKGRIIDLSLAAAKETGLYRMGVARVKVEAWTPGPSTAANAI
PGGRWCVQVGAFQREKDAVKLKEQLMRRYRTAKVIEFPGPTGHWVRVNPAHPSKASADEV
AASIHVSGGAEPYLVRTD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atccgctgccgccaggtacttgcaggctcggttgtgacgttcgcgctggtactgacgggc
tgtcataagaagcgcgtgcgtgctcaccatccacctccgcctcctccggcatcttcaggc
tccggaagatcctcaggccatggttcgacctcgggatcgacagcgaggacggctcctgct
ccacttcctccggcgcccccggatgttcgcggcaagccgagcctggtggagacgggaatt
gcaagctggtacggcccgccctatgccgggcgcaagggagccgatggcaaggtctacgat
cagaacgcaatgacggcggcccaccgcacgcttccgctggggtcgatcgtgcgggtcacg
aacctgagcacgaatcagtctgcggtggtcaagattaccgatcgcggccccttcgtaaaa
gggcgcatcatcgacctttctctggcggcagcaaaagagacgggcctctaccgcatggga
gtggccagagtgaaagtagaggcttggacacccggtcccagcaccgccgcgaatgccatt
cccggcggtcgctggtgcgtgcaggtaggagcgttccagcgtgagaaggatgccgtcaag
ctgaaggaacaactgatgcgccgctacaggaccgccaaggtgatcgagttccccggtccg
acaggccactgggtgcgcgtcaatccggcacatcccagcaaagcgagcgccgatgaggtg
gccgccagcatccacgtctccgggggcgccgagccctacctcgtgcgcaccgactga
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