Edaphobacter sp. 12200R-103: GWR55_12005
Help
Entry
GWR55_12005 CDS
T06408
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda00270
Cysteine and methionine metabolism
eda01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GWR55_12005 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eda03000
]
GWR55_12005 (dcm)
03032 DNA replication proteins [BR:
eda03032
]
GWR55_12005 (dcm)
03036 Chromosome and associated proteins [BR:
eda03036
]
GWR55_12005 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
eda02048
]
GWR55_12005 (dcm)
Enzymes [BR:
eda01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
GWR55_12005 (dcm)
Transcription factors [BR:
eda03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
GWR55_12005 (dcm)
DNA replication proteins [BR:
eda03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
GWR55_12005 (dcm)
Chromosome and associated proteins [BR:
eda03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
GWR55_12005 (dcm)
Prokaryotic defense system [BR:
eda02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
GWR55_12005 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
HTH_23
HTH_28
HTH_3
HTH_32
HTH_31
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QHS52367
LinkDB
All DBs
Position
2891488..2892786
Genome browser
AA seq
432 aa
AA seq
DB search
MPSESLSNLTSEPLALLAQVRQRMTQREIGKRLQVDPKTVGRWERRETDCPKYVQAALRE
MLPMRGRPEAPGNFTFIDLFAGIGGMRKGFESAGGHCIFTSEWNEWSKKTYRENFPNDEH
DIDGDITKVDAADIPDHDVLLAGFPCQPFSIAGVSKKNALGRPHGFECTTQGTLFFDVAR
IIAEKRPKAFLLENVKNLVSHDGGNTFRVIKETLSRELGYHVQAKVIDGQSFTPQHRERI
LIVGFREATGFSFDDFRKPEKGPVLGSILHPEDGSEAEETPFTTGPLAKVHAKYVLTEKL
WEYLQNYAAKHKAAGNGFGFGLVTPDMTTRTLSARYYKDGSEILVSRGGRKRPRRLTPRE
CARLMGFDAPGIVDKDRFIIPVSDTQAYKQFGNSVVVPVIREVARLMAPHIRILQQYEET
GILELPLFADAG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgaatctttatccaatctcacctccgaacccctggcacttctggcccaggta
cgacagcgcatgacacagcgcgagatcgggaaacgacttcaggttgaccccaaaacggtg
ggacgctgggaacggcgtgaaacggattgcccgaaatatgtccaagcggcacttcgggag
atgcttcccatgcgtggccgacctgaggctccgggcaatttcacgttcatagatttgttc
gccggcatcggcggaatgcggaaggggttcgaaagcgctggcggacactgcattttcaca
agcgaatggaacgagtggtcgaagaaaacctaccgcgagaatttcccgaatgacgagcat
gacatcgatggcgacattacgaaggtcgatgcggccgacattccggatcatgacgttctt
ctggcaggctttccctgccaaccattctccattgccggcgtaagcaagaagaatgcgctc
ggccggccgcacggattcgaatgcacgacgcagggaacgcttttcttcgatgtggcccgc
atcattgccgaaaagagaccaaaggcatttctgcttgagaacgtaaaaaacctggtgagc
catgacggcggcaacacgttccgtgtcataaaggaaacgctctccagggagctgggttac
cacgttcaggcgaaagtgatcgacggccagagtttcacgccgcaacatcgtgaacgcatt
ctgattgtgggcttccgcgaagcgacaggtttcagcttcgatgatttccggaagccggag
aaggggcctgtcctgggttcgatccttcaccccgaagacggctccgaagcagaggaaacg
cctttcacgaccggcccgcttgcgaaggtacatgccaaatatgtgctgactgagaaactg
tgggaatatctgcagaattacgcagcgaagcacaaagcggccggaaacggtttcggcttc
ggtctggtcacgcccgacatgaccacgagaacgctgagcgcccgctattacaaggacggc
tccgaaattctcgtcagtcgcggcggcaggaagcgcccgcgccgccttactcccagagaa
tgtgcccgcctcatgggcttcgatgccccgggcattgtagacaaagataggtttatcatt
cccgtctcggacacacaggcctacaagcagtttggaaacagcgtcgttgtgccagtgatc
agagaagtcgcgcggctcatggctccgcatatccgtatcctgcagcagtacgaagaaacg
ggcatcctggagttgccgctgttcgccgatgcgggctag
DBGET
integrated database retrieval system
