Edaphobacter sp. 12200R-103: GWR55_12095
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Entry
GWR55_12095 CDS
T06408
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
eda
Edaphobacter sp. 12200R-103
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eda03032
]
GWR55_12095 (gyrA)
03400 DNA repair and recombination proteins [BR:
eda03400
]
GWR55_12095 (gyrA)
Enzymes [BR:
eda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GWR55_12095 (gyrA)
DNA replication proteins [BR:
eda03032
]
Prokaryotic type
DNA Topoisomerases
GWR55_12095 (gyrA)
DNA repair and recombination proteins [BR:
eda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GWR55_12095 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HEN1_C
Motif
Other DBs
NCBI-ProteinID:
QHS52383
LinkDB
All DBs
Position
2910020..2912920
Genome browser
AA seq
966 aa
AA seq
DB search
MADEQNPQLPLGSNPDNPDGNLIKGPGAAQLLPINIEDEMRRSYLDYSMSVIIGRALPDV
RDGLKPVHRRILYGMQEMGLQYNKKYTKSAKVVGHVMGNYHPHGDSAIYDTMVRLAQDFS
LRYTLVDGQGNFGSIDGDPPAAMRYTESRLTRIAGEMLADIDSDTVDFAPNYDESTLEPT
VLPARIPNLIINGGGGIAVGMATNIPPHNLTEVINACISLINKEKTDIRPDIQLVLEHVQ
GPDFPTGGYLYGRAGIAQTYNTGRGRFIMRAKVGTEKITGGREAIVVTEIPYQVNKANLI
KRIAELANEKIIDDISDVRDESDRDGMRIVIELKRGAESQIVLNQLFKHTSMQESFSMIF
LAVHNGQPKVLPLDQAIRAFLEHRIEVVRRRTAFLLGKARDREHILLGYQIALDHLDNVI
KIIRQSGSRAEARENLFQYFSNKRINLRGTELAGVTLDPAKYSVDMTFSTTGTLILSYRQ
VDAILELQLYRLTQLSIDELLNELKNVRANIEEFESILASEKKLRRVIVKELEEVRDKYG
DERRTEIIDETTEIQLEDLIADEQVAVTISNTGYLKRTPISTYRQQRRGGTGRLGMKTRE
EDFVAQLIVESTHAYLLCFTNTGRVYWLKVYEIPDVGAAGKGKAMASLIALQPGEKVVTI
LGIRDLTEEGKFILFATRNGTVKKTPLPDFSNVMSRGIIAINIDKDDELIACRVTSGSDV
VFLATHDGMAVRFSEAYDPEKSGGLRPMGRAAAGNKGITLKKGDYVIGLAVTPSAEYRAQ
RRDELAAEKGLAKDLAKVRAEIDAANEALQKAREAANGGEKEDDKVKAARRKRDDAYARR
DALDEKLGLSPCLILSVTENGFGKRTNVEEYRLTNRGGSGVINMKATAKTGKVSSVQLVD
DTSELMAISQFGKIIRIDTSSIRAAGRSTQGVKLLNLEADDKVAAAVVIPPDESGKSEPE
TGTLLQ
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaacagaaccctcagctcccgctcggctccaaccctgacaatccagatggc
aacctcatcaagggtcccggtgcggcacagctcctccccatcaatatcgaagacgagatg
cgccggtcgtatctcgactactccatgtccgtcatcatcggacgcgccctgcccgatgtg
cgcgatggcctgaagcccgtgcaccgccgtatcctctacggaatgcaggagatgggcctg
cagtacaacaaaaagtacaccaagtccgccaaggtcgtcggccacgtcatgggtaactac
cacccccacggcgactccgccatctacgacaccatggtccgcctcgcgcaggatttctcc
ctccgctacaccctcgtagacggccagggcaacttcggctccatcgacggcgacccgccc
gcggccatgcgttacaccgagtcgcgcctcacccgcatcgccggggagatgctcgccgac
atcgactccgacactgtcgatttcgcccccaactacgacgagtcgaccctcgagcccacg
gtccttcccgcccgcattcccaacctcatcattaatggtggcggcggtatcgccgtcggc
atggcgaccaacatcccgccgcataatctcaccgaggtcattaacgcgtgcatctccttg
atcaacaaggagaagaccgacatccgccccgacatccagctcgtccttgagcatgtccag
ggtcccgattttcccaccggaggctatctctacggccgcgccggaatcgcccagacctac
aacaccggccgcggacgcttcatcatgcgcgccaaggttggcaccgagaagatcaccggc
ggacgcgaagccatcgtcgtcaccgagattccttaccaggtcaacaaggcgaacctcatc
aagcgcatcgccgaactcgccaacgaaaagatcatcgacgacatctccgatgttcgtgac
gaatccgaccgcgacggcatgcgcatcgtcatcgagctcaagcgcggagccgaatcccag
atcgtcctcaatcagctcttcaagcacacctccatgcaggagagcttctcgatgatcttc
ctcgccgtccacaacggccagccgaaggtcctcccgctcgaccaggccatccgcgccttc
ctcgagcaccgtatcgaggtcgtccgccgccgcactgccttcctgctcggcaaggcccgc
gaccgcgaacacatcctgctcggctaccagatcgcgctcgaccacctcgacaacgtcatc
aagatcatccgccagtccggctcccgcgccgaggcccgcgagaacctcttccagtacttc
tccaacaagcgcatcaacctgcgcggcaccgagctcgccggagtcaccctcgaccccgcc
aagtactcggtcgacatgaccttctcgaccaccgggaccctgatcctcagctaccgccag
gtcgacgccatcctcgagctgcagctctaccgcctcacccagctctccatcgacgagctc
ctcaacgagctgaagaacgttcgcgccaacatcgaagagttcgagtccatcctcgcgtcg
gagaaaaaacttcgccgcgtcatcgtcaaggagctcgaagaggtccgcgacaagtacggc
gacgagcgccgcaccgagatcatcgacgagaccaccgagatccagctcgaagacctcatc
gccgacgagcaggtcgccgtcaccatctccaacaccggctacctcaagcgcacccccatc
tccacctaccggcagcagcgccgcggtggaaccggacgcctcggcatgaagacccgcgaa
gaggacttcgtcgcccagctcatcgtcgaatccacgcacgcctacctgctctgctttacc
aataccggccgcgtctactggctcaaggtctacgagattcccgacgtcggcgccgcaggc
aagggcaaggcgatggcctcgctgatcgcgctgcagcccggcgaaaaggtcgtgaccatt
ctcggcatccgcgacctgacggaagagggtaagttcatcctcttcgcgacgcgcaacggc
accgtcaagaagactccgctgcccgacttctcgaacgtcatgagccgcggcatcatcgcc
atcaacatcgacaaggacgacgaactgatcgcctgccgcgtcacctccggctccgacgtc
gtcttcctcgccacccacgatggcatggccgtccgcttttccgaggcctacgatcctgag
aagtccggcggacttcgccccatgggccgcgccgccgccggcaacaagggcatcaccctt
aagaagggcgactacgtcatcggcctcgccgtcaccccgtcggccgagtaccgcgcccag
cgtcgtgacgagctcgccgccgaaaagggtctggccaaggatctagccaaggtccgcgcc
gagatcgacgccgccaacgaggccctgcagaaggcccgcgaagctgccaacggaggcgaa
aaggaagacgacaaggtcaaggctgcccgccgcaagcgcgacgatgcctacgccaggcgc
gacgccctcgacgaaaagctcggcctcagcccctgcctcatcctctcggtgacggagaac
ggcttcggcaagcgcaccaacgtcgaggagtaccgcctcaccaaccgcggcggctcggga
gtcatcaacatgaaggccacggccaagaccggcaaggtctcctccgtccagctcgtcgac
gacaccagcgagctgatggccatctcccagttcggaaagatcatccgcatcgacaccagc
agcatccgcgccgccggccgctccacccagggagtcaaactcctcaacctggaagccgac
gacaaggtagccgccgccgtagtcatcccaccggatgaatccggtaagtcagaaccagag
acgggaacgctgttgcagtaa
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