Edaphobacter sp. 12200R-103: GWR55_12840
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Entry
GWR55_12840 CDS
T06408
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
eda
Edaphobacter sp. 12200R-103
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
eda01002
]
GWR55_12840
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eda01011
]
GWR55_12840
Peptidases and inhibitors [BR:
eda01002
]
Cysteine peptidases
Family C82
GWR55_12840
Peptidoglycan biosynthesis and degradation proteins [BR:
eda01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GWR55_12840
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QHS52514
UniProt:
A0A6B9YSX5
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Position
3096460..3098226
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AA seq
588 aa
AA seq
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MIKSALRSAGILSLLALLFTFSGCHRHRKTTSAPNTTDYSDDIQSLVAFSRLSFLRWPNI
SDYEPLVKTFYDDRNYEIAWTRDGKPTPAAQGFIKAFAEAADKGLNPEDYDNSRWPARIQ
SLSSGHEDVVAKFDVAMTVNVMRFISDLRIGRVNPQHFNFGIDVANKKYNLAEFISDHAV
DITDVPKLLATVEPDSDNYRRTEDALTHYVELARQEPAGSAAQPLPTVTKSLSIGETYPA
AGQLEQRLLLEGDIASSAESATQEKTDDAPHVITKRISEGLRAYQERHGLTIDGRLTSET
VTSLNVPMSQRVAQLQYALERWRWLPDPYLNPRLLVNLPEFVLRAYSPDHNLEFKMKVVV
GKVIGEHQTPVFARMMRYLVFRPYWNVPTSIVRKELIPHIQANHNYLESKNFEVYNNKGQ
TVSDYTVKQLAQGGLMVREKPGPRNSLGLVKFMFPNQYDIYLHSTPATELFNRTRRDFSH
GCVRVQKPADLAAWLLDGQKDKDGKEWSLDKVQQAMNAGPNNYQVNLKTPIPIVIFYVTA
EVEEDGHVHFFNDIYGYDESLRKTLEKGPPYPIRPDAVASRPKTDNTV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaaatctgctcttcgctccgccggtatactctcgctgctggcactgctttttacc
ttctccgggtgccatcgtcatcgcaagaccacttcggctcccaacacaaccgactactcc
gacgacattcagtcgctggtcgcgttcagcaggctcagcttcctccgctggcccaacatc
tccgactatgagccgttggtaaaaaccttctatgacgatcgcaactacgagatcgcctgg
acccgtgacggcaagcctacccctgccgcgcagggctttatcaaggcctttgccgaggca
gccgataagggactgaatcccgaagactacgacaactcccgctggcccgcccgcatccaa
tcgctctcatcgggccacgaggatgtggtcgcgaagttcgatgtcgcaatgaccgtcaat
gtcatgcgcttcatctccgacctccgcatcggccgcgtcaatccgcagcacttcaacttc
ggcatcgacgtggccaacaagaagtacaacctcgccgagtttatctccgatcacgccgtc
gacatcaccgatgttcccaagctgctcgccaccgtcgagccggactcggacaactatcgc
cgcaccgaagatgccctgactcactacgttgagctcgcgcgccaggagcctgccggttcc
gcagcacagccactccccacagttacaaagtctctgagcattggcgagacctatccggcg
gccggccagctcgagcagcggctcctcctcgaaggcgatatcgcatcctctgccgagtct
gccacccaggagaagacggatgacgccccgcatgtcattacaaagcgcatcagcgaagga
ctacgcgcctaccaggaacggcatggtctcaccatcgacggaaggctgacgtccgaaacc
gtcacaagtctcaacgttcctatgtcgcagcgtgttgcccagcttcaatacgcccttgag
cgctggcgctggctgcccgatccctacctgaatccacggctgctggtaaacctgcctgag
tttgtcctgcgtgcctatagccctgaccataatctcgagttcaagatgaaggtggtcgtc
ggcaaagtcatcggcgagcaccagactcccgtctttgcccgcatgatgcgctacctggtc
ttccggccttattggaacgtgcctaccagcatcgtccgcaaagagctgatcccacatatt
caggcaaatcataactacctcgagtcgaagaacttcgaggtctacaacaacaaggggcag
acggtatcggattacaccgtaaagcaacttgcgcagggcggcctgatggtgcgggaaaag
cccggcccaagaaattcgctgggactggtgaagttcatgttccccaaccagtacgacatc
tacctgcactccacgcctgcaaccgagctcttcaatcgaacgcgccgcgacttcagccac
gggtgtgtccgtgtgcagaagcccgccgacctcgcggcatggctgctcgacggacagaag
gacaaggacggaaaggagtggagcctcgacaaggtgcagcaggccatgaatgcaggcccc
aacaactatcaggtcaacctcaagacgccgattcccatcgtcatcttctacgtcaccgcc
gaggtcgaagaagacggccacgttcatttctttaacgacatctatggctacgacgagagc
ctgagaaagaccctcgaaaagggaccgccgtatcccatccggcccgacgcggtagcctcc
aggccaaagaccgataacaccgtctga
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