Edaphobacter sp. 12200R-103: GWR55_13205
Help
Entry
GWR55_13205 CDS
T06408
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
eda
Edaphobacter sp. 12200R-103
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eda02000
]
GWR55_13205
Transporters [BR:
eda02000
]
Other transporters
Pores ion channels [TC:
1
]
GWR55_13205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QHS52575
LinkDB
All DBs
Position
3175661..3177493
Genome browser
AA seq
610 aa
AA seq
DB search
MIVPVLSFLFLLLIAIISVPAWAQEQPSGRPDEVNESVTVTTAIPPIPLSESNRSVMVLD
TREQPLLFNNVTDYLRQDTTVNLQSRAPSGVQADLSIRGTTFEQSLVLLNGLRINDPETA
HLNLDIPVPLDALSRVEVLHGSGSTFYGSDAIGGAVNLITERPPAEPRLSLIAKSGAGNY
GSLENHLRADLSTRLFSEQITGSRDTSNGFMPDRNYSSNALSSETWLSVLKPGTTDILLA
GSDRPYGANQFYGNYDSWERTKGWFAALQQQVGQRTSASFAYRRHTDLFVLLLDRPNYYR
NNHITSAWQAALRRADPIGSNTTLSYGLEANGDSIHSSNLGIHARNQGAGYANLSLRALG
RFSLSLGAREQVFSGGDSVFSPNVAAAYTLTSTVRLRASVGHGYRLPTYLDLYYADPATI
GNPNLKPESSWSYEGGVDWTPASGLLTVSATGFSLRQKNGIDYSKDALSDPWQAVNVANF
AYSGAEANVRFRLPRAQQLQMGYTAVQAGSPPKGLISEYAFNYAAQSALIAWSGQLPAQI
VARSQLAVIQKTMQSPYPLWDISMARDTGRLRPYVRVLNLTDTAYQEIPGVPVQGRTIMA
GMQLNWRRNR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtccctgtgcttagcttcctgtttcttcttttgatcgcgatcatctctgttcct
gcgtgggcgcaggaacagccgtccgggcgtccggatgaggttaacgagagcgtaaccgtc
acgacagcgattcctccgattccgttgtcggagtcgaaccggtcggtgatggtgctggat
acgcgggagcaacctttgctcttcaacaacgtgaccgactacctgcggcaggacacgacg
gtcaacctgcagtcgcgcgcgccttcgggagtgcaggccgatctttcgattcgcgggacg
acgtttgagcagtcgctggtgctgctcaacgggcttcgcatcaacgatcccgagaccgcg
cacctgaacctcgacattcccgtgccgctcgatgcgctctctcgggtggaggtgttgcat
ggttcgggctcaaccttctatggctccgatgcgattggcggtgcagtcaacctgatcacc
gagcgtccgccggcggaaccgaggctttcgctgattgcgaagtcgggcgcgggaaattat
gggtcgcttgagaatcatctgcgtgcggacctgagcacgcgactgttcagcgaacagatt
accggcagccgcgatacttccaacggttttatgcccgaccgcaactattcgagcaatgcg
ctctcgtcggagacgtggctgagcgtactgaaaccgggaacgaccgacattctgctggcg
ggcagcgaccggccgtatggcgcgaatcagttttacggcaactacgactcgtgggagcgc
acgaagggatggtttgcggcgctgcagcagcaggtggggcagcggacttcggcgagcttc
gcgtatcggcggcacacggatctcttcgtgctgctgctggaccggcccaactactatcgc
aacaaccacatcacgtctgcgtggcaagctgctctgcgaagggctgacccgatcggatca
aacacgacgctctcctatgggctcgaggccaatggagattctatccacagcagcaacctc
ggcatccatgcgcgcaaccagggcgcgggatatgcgaatctttcgctgcgggctcttggc
cggttttcgctttcgctgggggcacgcgaacaggtcttctcgggcggcgactccgttttt
tctccgaacgttgcggccgcctatacgctgaccagcacggtgaggctgcgggcttccgtg
ggacatggctatcgtctgccgacctatctcgatctgtactatgcggacccggcgacgatc
gggaatccgaatttgaagcctgaatcgtcatggagctacgagggcggagtggactggact
ccggcaagtgggttgctgactgtaagcgccaccggcttcagccttcgtcagaagaacggc
atcgactactcgaaggatgccctgtcggatccgtggcaggcggtcaacgtcgccaacttt
gcctacagcggcgccgaggcgaacgtgcgattccggctgccgcgcgcgcagcagttgcag
atgggctataccgccgtgcaggcgggatcgccgccgaagggcttgatctcggagtacgcc
ttcaactacgctgcgcagtcggctctgatcgcatggagcggtcagcttccggcgcagatc
gtcgcgcgatcgcagcttgccgtgatccagaagacgatgcagtcgccatatccgctatgg
gatatctcgatggcgcgagacacaggacggctgcgcccctacgttcgcgtgctgaacctc
accgatacggcataccaggagattcccggggttcccgtgcagggccgcaccatcatggcg
gggatgcagttgaactggcggaggaatcgatag
DBGET
integrated database retrieval system
