Edaphobacter sp. 12200R-103: GWR55_14505
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Entry
GWR55_14505 CDS
T06408
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
eda
Edaphobacter sp. 12200R-103
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eda03400
]
GWR55_14505
Enzymes [BR:
eda01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GWR55_14505
DNA repair and recombination proteins [BR:
eda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GWR55_14505
Prokaryotic type
GWR55_14505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QHS52793
UniProt:
A0A6B9YVD4
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All DBs
Position
3490486..3491955
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AA seq
489 aa
AA seq
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MGRSRGEAREDREIEGGSAELNALTDDTRVTVRRPGKPDPNGRCVVYWMQRAQRGRDNHA
VDVAVKAANVLGLPLVTYFAAISNFPHANLRHYAFLQQGLKDIEEDLAERGIAFVMRRSP
HESHEHLFADVGAAMVIGDENPLREPERWRRELASRLRIPFWTVDADVVVPSKLMERAQY
GAYTMRPRLYRLLPDYLQPYENLKAEHEWKRPRGFHGDVLDEDITRGWRDLDRSVLPVKA
WTGGTHAARRRLHHFVEKILPDYEASRNRPEQDGTSCLSPYLHFGHIGPLTIALAVEAAV
KKHPRLHPARDAFFNELIVWRELAVNFVRYTKHYDADECAEPWARKTIAEHARDEREFTY
TLSQLEGAKTHDPLWNAAQSQMLHHGWMHNVMRMYWAKKILEWSPDISTAMRHAIHLNDK
YFLDGRDPNGYAGLAWAILGKFDRAWNERPVFGKIRYMSGASTGRKFNSRLYMQQMEILP
RQKGFDFAG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgggaagatcgagaggcgaggcgcgggaggaccgcgagatagaaggcggttcggccgag
ctgaacgcgctgacagacgatacgcgtgtaacggtgcgtcgtccgggtaaacccgatccg
aatggcaggtgcgtcgtctactggatgcaacgggcgcagcgcggaagggacaatcatgcc
gtcgatgtcgccgtgaaggcggcgaatgtgctggggctgccgctagtgacgtacttcgcg
gccatctccaactttcctcacgccaatcttcgtcactatgcatttttgcagcagggcctg
aaggacatcgaggaagacctggcggagcgcgggattgcatttgtgatgcgccggtcgccg
catgagtcgcacgagcacttgttcgccgatgtgggggcggcgatggtgattggcgacgag
aatccgttgcgcgaaccggaacgctggcggcgtgagctcgcttcacggctgcgcattccg
ttttggacggtggatgctgatgtcgtcgtgccctcgaagttgatggagcgggcacagtac
ggcgcatacacgatgcggccaagactctaccgcttgttgccggactatctgcagccatac
gagaacctgaaggccgaacacgagtggaagaggcccaggggatttcacggcgatgttctg
gacgaggacatcacgcggggctggagggatctggatcgcagcgtgcttccggtgaaggcg
tggacaggcggaacgcacgctgcgcgcaggcggctgcatcactttgtcgagaagattctg
ccggactatgaggcatcgcgcaatcgccccgagcaggatggaacctcctgcctgtcgccg
taccttcactttggccacatcggtccgctgacaatcgcgctggcggtcgaggctgcggtg
aagaagcatccgcggctgcatccggcgagggatgcgttcttcaacgagctgatcgtttgg
cgtgagctggcggtgaactttgtgcgttatacgaagcactatgacgcagacgagtgtgcc
gagccatgggcccggaagaccatcgccgagcacgcccgcgatgagcgcgaattcacctac
acgctaagccagcttgaaggcgcgaagacgcacgatcccctgtggaacgcggcgcagagc
cagatgctgcaccatggctggatgcataacgtcatgcggatgtactgggccaagaagatc
ctggagtggagtccggatatcagcaccgccatgcgccatgcaatccatctgaacgataag
tattttctggatggccgcgacccgaatggatatgcggggttggcatgggccatcctgggc
aagttcgaccgcgcatggaacgagcggccggtattcggcaagattcgttatatgtcggga
gcttcgaccggacggaagttcaactccaggctatatatgcagcagatggagattcttccg
cggcagaaggggttcgatttcgcgggctga
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