Edaphobacter sp. 12200R-103: GWR55_14520
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Entry
GWR55_14520 CDS
T06408
Name
(GenBank) choice-of-anchor D domain-containing protein
KO
K20276
large repetitive protein
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GWR55_14520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASH
DUF1573
TMEM131_like_N
BNR
Sortilin-Vps10
Reelin_subrepeat-B
Motif
Other DBs
NCBI-ProteinID:
QHS52796
UniProt:
A0A6B9YTD0
LinkDB
All DBs
Position
3494602..3499002
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AA seq
1466 aa
AA seq
DB search
MWRAKFIQLEVWLPCGRCFAGAAAWLSILCVLLCSTPGWAQSSPLPAWQPLGPAQVNTQA
YGKVTGRITAIAIDPADATGNTMYVGTTGGGVWKSSNAAGPASGVSFQPLTDTLPVFNGN
AGSPAVPSLSIGALSVKGPLVLAGTGDPNDATDSFYGGGLLRSADAGGTWTLINGSQDSP
NENYSFAGRSFAGFAWSTVSADTVVAAVSEAAEGNLTGAPSPADSVMGLYYSTDAGQTWH
MSTVMDGGQYVQRPQAAGVITSGGNAATAVIWNPIRKRFYAVIRYHGYYESADGVTWSRL
AQQPGPGLSTAACPANPNQTGSLACPVFRGVLAVEPVSGDMYALTVGSGNQDQGIWRDVC
ANTGSGCAGVVSFAQQLAGSSLEASSGDIPQGDYDLSLAAVPSGSDTLLFAGTIDLYRCA
VSACSSMRNTTNVFNGCGASAHVAPAQHALAVRATTGLPMVYVGNDGGLWRSADGVNQQA
TPCSPDDAVHFENLNGGLGSLAQVQGLAQHPTDPSILLAGLGANGTAATTAATSTGTAQW
NQLAAGEGGNVAIDAANPDLWYISTAAGVSIRRCDHGTTCSTSDFIGPPTIGPAQTANDP
SLTQTPWLLDPALSSNLIAGTCRTWRGPAADGALWSGDNAISRPLAGPQSGICTLSNAMI
RSLAAGGPVFNAPASQSSGSQVLYAGMAGAADGGASAGGHLFVTQAAQTGTSVSAWSDVT
GSPVTNATAFNPGGYDISSIAVDPHDPTGATVYATIRGFHVPHVYRSTDAGAHWTNISRN
LPDLPANSVAVDPNDANTIYVALDSGVYATSQVTTCPTANCWNVYGSGLPNAPAMLLDVA
PAMSTGDGRSGELRVATYGRGVWQIPLLTAASPAQPAITPSPTALSYADQAVGTASAPIS
ITITNSGNAPLTVSRIDISLSALALGPQAEFFETNTCTDSPLPAGQSCTISASFAPAATG
DRSATMTIFANIAGGQVTIPLSGKGTPGSPVVLTPLFVDYGTVDVNAGSAVQNVTISNTA
TFDIALGTPAVSGDYRISANTCTGLLKPASGCTVGIVFTPTASGVRSGSLNVTANGSNLT
ASLTGRGVLPATDGLAPAQLTFAAQPLGTSSALQNVVLTNTGDKALTLIAAATTGDFIAV
NSCGNSLAGHSTCRIGVIFQPTALGQAAGTLTLSDQYRTQKVVLSGTGIAPPGVSLSPLF
GMSFPATGVGLNSVPQTVTLTNNGGTPLSISTIAVSGDFAIAPGGNACTDTVPIGSACTL
QIAFRPTAGGVRKGALTISDSAPGSPQTLPLTGSGVAFSLAFNGPSTVTTSSGQNAVFPL
LLTTGPVVSGAMIALTCTGAPVNSTCNITPSTIPVDGNAATVAVTVLTGVPNLVQSHRPR
QYVWFALALPVGLLGLRRRHLAAAALLCVLLVAGGCGAGRLIPASGGPGSGSGSTNTVTP
NGTYTIVVTGTSAGLTRSVDLTLVVQ
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgcgcgaaattcatccagctcgaggtgtggctcccctgcggaagatgctttgca
ggcgccgctgcgtggctctcaatactgtgcgttttgctgtgcagcacgcctgggtgggcg
cagagctcacctctacccgcatggcagccgctggggcccgcgcaggtaaacacgcaggca
tatggcaaggtgacgggaaggatcacggcaattgcgatcgaccctgccgacgccaccgga
aacacgatgtatgtaggaaccacaggcggcggtgtctggaagtcgagcaacgctgccgga
ccggcttcgggggtgagttttcagccgctcaccgatacgcttcctgtcttcaatggcaac
gcgggcagtccggcggttccttcgctcagcattggtgcgctcagtgtgaagggtcctctg
gtgcttgcgggaaccggcgacccgaacgacgcaaccgattccttctacgggggtgggttg
ctgcggtcggccgatgcgggtggaacctggacgctgataaacggctcgcaggattctccc
aacgaaaactactcgtttgcagggcgcagctttgcaggattcgcatggagcacagtcagc
gccgacacggtggtggccgcagtctccgaggccgcggaaggaaacctcaccggagcgccg
agcccggcggacagcgtgatggggctgtactactcgaccgatgccggccagacctggcac
atgagcaccgtgatggatggcggccagtatgtgcagcgtccgcaggctgccggggtgatc
accagcggcggcaacgcggcgactgcggtcatctggaatccgatcaggaagcgcttctat
gccgtgattcgttatcacggctactacgagtcggcggatggcgtgacgtggtcgcgtctt
gcgcagcagccggggccggggcttagtacggcggcgtgcccggcgaatccgaaccagacc
ggaagccttgcatgcccggtctttcgcggggtgcttgcagttgagcctgtgagcggagat
atgtacgccctcacggtaggctcggggaatcaggaccaggggatctggcgcgatgtgtgc
gcgaacaccggcagcggctgtgccggggtggtctcgttcgcgcagcaattggcgggcagc
tcgcttgaggcgagcagtggagacattccgcagggtgactacgatctttcgcttgcggca
gtgccctctggaagtgacacgctgctctttgcgggaacgatcgatctttatcgctgcgcg
gtgagtgcctgctcctccatgcgcaacacgacgaacgtcttcaacggctgcggcgcttcg
gctcacgtagctccggcgcagcatgctcttgcggtgcgggctacgaccggtctgccgatg
gtgtatgtgggcaacgatggcggactatggcgctcggccgatggcgtcaaccagcaggcc
acgccgtgttcgccggacgatgccgtgcacttcgagaacctgaacggcgggctgggctcg
ctggcccaggtgcagggcctggcgcagcatccgaccgacccgtcgatactgctggccgga
ctgggagcaaacgggaccgcagccacaaccgctgcaacgtccacgggtaccgcgcagtgg
aaccagcttgcggcgggcgagggtggaaatgtcgccatcgatgcggccaaccccgatctc
tggtatatctcgactgccgcgggcgtcagcattcgccgctgcgatcatggcacaacatgc
tcgacgagcgacttcattgggccgccgaccattggccccgcacagacggcgaacgatccc
agtctgacccagacgccgtggctgcttgatcctgcgttgagctcaaatctgatcgccgga
acctgccggacgtggcgcggaccagcggcggatggagcgctgtggtccggtgacaacgcc
atcagccgtccgctggccggtccgcagagcgggatatgcacgttgtcgaacgcgatgatc
cggtcgctggcagcgggagggcctgtattcaacgcgccggcctcacagagctccggctcg
caggttctttacgctggaatggccggagccgcggacggtggcgcatcagccgggggacat
ctgtttgtgacacaggccgcgcagaccggaaccagcgtcagtgcatggagcgatgtcaca
ggttcgccggtcacgaatgcgacggcgttcaatccgggcggttacgacatctcgtcgatt
gcggtcgatccgcacgatccaaccggagcgaccgtgtacgccacgattcgcggcttccat
gtgccgcatgtatatcgctcgaccgatgcgggagcgcactggaccaatatctcgcgcaac
ctgccggaccttccggccaatagcgtcgcggtcgatccgaacgacgccaacacgatctat
gtagcattggacagcggggtctacgcgaccagccaggtgacgacctgccccacggccaat
tgctggaacgtctacggatcgggcctgccgaatgccccggcgatgctgctcgatgtagct
ccggcgatgagcacgggtgacggtcgcagcggcgaacttcgtgtggcgacctatggacgc
ggcgtatggcagattccgctgctcactgcggcatctccggcgcagcccgctatcacgcct
tctcccactgcgttaagctatgccgatcaggcggtcggcacggcgagcgctcccatcagc
attaccatcacgaacagcggcaatgctcccctgaccgtcagccgcatcgacatcagtctt
tcggcgcttgcacttggaccgcaggcggagttcttcgagacgaacacctgtacagattct
ccgcttccggcagggcaaagctgcacgatctcggcgagcttcgcgcctgcagctactgga
gatcgctcggccacgatgaccatctttgcgaatatcgcgggcggacaggtgacgattccg
ctctccggcaagggaacgccggggagtccagtcgtgctgacgcctttgtttgtggactac
ggcacggtcgatgtgaacgccggcagcgctgtccagaacgtcacgatctcaaacaccgca
accttcgacattgcgcttggaacgcctgcggtcagcggggattaccgcatctccgcgaat
acctgtacgggcctgctgaagcctgcgagcggatgcacggttgggattgtgtttacgccg
acagcatccggggtgcgttccggcagtttgaacgtgacggccaacgggtcgaaccttacg
gcatcgctgacagggcgtggtgtgctgcctgcgaccgatggcctggctccggcgcagctt
acctttgcggcgcagccgctaggcacatcgagcgcactccagaacgtcgttctgacgaac
accggcgacaaggccctgaccctgatcgcagccgcgacgaccggcgacttcatcgcggtc
aactcctgcgggaactcgctggcgggccactccacctgcaggatcggggtgatcttccag
ccgacagcgctggggcaagcggcgggaacactgaccctctcggaccagtaccgcacgcag
aaggttgtactgagcgggacgggaatcgccccgccgggcgtctcgctgtctcccttattc
ggcatgagctttccggcaaccggcgtcgggctgaactctgttccgcagactgttacgtta
acgaataatggcgggactccgctgtctatctcaaccattgcggtcagcggcgattttgcc
attgcgccaggaggcaacgcctgcaccgacactgttcctatcggctctgcctgcaccctg
cagatcgccttcaggccgacggccggaggcgtcaggaagggtgcgctgaccatcagcgac
agcgccccaggttcgccgcagacgcttccgctcaccggttccggggtggcgttctcgctg
gcgttcaacggcccttcaacggtgactacctcgagcggacagaacgccgtgtttccgctg
ctgctgacgactgggcccgtcgtcagcggagcaatgatcgcgctgacctgcacaggagcg
ccggtcaattccacctgcaacatcacgccttccacaattccagtggatggaaatgcggcg
acggttgcagtgacggtactgacgggagttccgaacctggtgcaatcgcacaggccaagg
cagtatgtgtggtttgcgctggcgcttccggtgggactgctgggactgcgacggagacat
ctggccgctgctgcgctgctgtgcgttctgctggttgcgggcggctgcggagcaggacgg
ctgattcccgcatccggtggtccaggctccggcagcggaagcaccaacacggtgactccc
aacggaacctacacgatcgtggtgacgggaacgagtgccgggctgacgcgcagcgtcgac
ctgacgctggtggtgcagtag
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